New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4960320 =	73 (1.150)	5 (0.080)	4/260	NT	6.8%	coding (151/1779 nt)	fliF	flagellar M‑ring protein
	?	NC_002947	4960368 =	66 (1.060)					coding (103/1779 nt)	fliF	flagellar M‑ring protein

CCCCGAGTTGGGCTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTT  >  NC_002947/4960177‑4960463                                                                                                                                                |                                                                                                                                                ccccGAGTTGGGCTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGc                                                                                                                                            >  5:57562/1‑149 (MQ=255) ccccGAGTTGGGCTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGc                                                                                                                                            >  3:26157/1‑149 (MQ=255) ccccGAGTTGGGCTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGc                                                                                                                                            >  2:237482/1‑149 (MQ=255)            gCTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAgg                                                                                                                                 >  7:95615/1‑149 (MQ=255)            gCTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAgg                                                                                                                                 >  3:148283/1‑149 (MQ=255)             cTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGc                                                                                                                                <  8:95615/149‑1 (MQ=255)             cTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGc                                                                                                                                <  7:88791/149‑1 (MQ=255)             cTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGc                                                                                                                                >  2:247094/1‑149 (MQ=255)                 aCGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGAc                                                                                                                            <  6:199867/149‑1 (MQ=255)                 aCGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGAc                                                                                                                            <  3:369936/149‑1 (MQ=255)                  cGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGAcc                                                                                                                           <  3:341066/149‑1 (MQ=255)                    ttctaGGGGATGGCAGCAGCGGGCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCag                                                                                                                         <  7:250564/146‑1 (MQ=255)                      ataGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCag                                                                                                                         >  5:12858/1‑147 (MQ=255)                                 tgtaacccatggctgaagcagtcgtcgaaaacgcccccgccaaagctggctcgccagcggccaagccgccgctgtttggcatggcgtttctggaaaacatctcgcagatgcCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTgg                                                                                                            <  8:315235‑M1/38‑1 (MQ=255)                                 cagcagCGGCCAGGGGGGCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTgg                                                                                                            <  6:246074/149‑1 (MQ=255)                                  agcagcGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTgg                                                                                                            <  4:221261/148‑1 (MQ=255)                                    cagcGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGgcg                                                                                                          >  1:264438/1‑148 (MQ=255)                                     agcGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCgca                                                                                                        <  3:383724/149‑1 (MQ=255)                                         gCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAACAt                                                                                                    <  6:360028/149‑1 (MQ=255)                                         gCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACAGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGAt                                                                                                                >  4:283791/1‑137 (MQ=255)                                         gCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACAGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGAt                                                                                                                <  3:283791/137‑1 (MQ=255)                                           cAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATgg                                                                                                  >  5:63886/1‑149 (MQ=255)                                            gctgaagcagtcgtcgaaaacgcccccgccaaagctggctcgccagcggccaagccgccgctgtttggcatggcgtttctggaaaacatctcgcagatgcCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATgg                                                                                                  >  7:315235‑M1/101‑148 (MQ=255)                                            gctgaagcagtcgtcgaaaacgcccccgccaaagctggctcgccagcggccaagccgccgctgtttggcatggcgtttctggaaaacatctcgcagatgcCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATgg                                                                                                  >  3:81629‑M1/101‑148 (MQ=255)                                                 gtCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCt                                                                                            <  1:247094/149‑1 (MQ=255)                                                    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACATCGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGGATCTGCg                                                                                         <  6:12858/149‑1 (MQ=255)                                                    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGAcc                                                                                                                           <  6:24097/115‑1 (MQ=255)                                                    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGAcc                                                                                                                           >  5:24097/1‑115 (MQ=255)                                                    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGAcc                                                                                                                           >  5:29635/1‑115 (MQ=255)                                                    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGAcc                                                                                                                           <  6:29635/115‑1 (MQ=255)                                                    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGc                                                                                          <  7:214721/148‑1 (MQ=255)                                                    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGc                                                                                          >  7:334599/1‑148 (MQ=255)                                                     gtcgtcgaaaacgcccccgccaaagctggctcgccagcggccaagccgccgctgtttggcatggcgtttctggaaaacatctcgcagatgcCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGc                                                                                          <  1:375983‑M1/56‑1 (MQ=255)                                                     aTGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGc                                                                                          >  5:151866/1‑147 (MQ=255)                                                     aTGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCga                                                                                        <  6:57562/149‑1 (MQ=255)                                                        gtcgaaaacgcccccgccaaagctggctcgccagcggccaagccgccgctgtttggcatggcgtttctggaaaacatctcgcagatgcCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGAt                                                                                     >  2:375983‑M1/89‑149 (MQ=255)                                                          cTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGt                                                                                   >  1:31856/1‑149 (MQ=255)                                                             gttGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGttt                                                                                 <  4:26157/147‑1 (MQ=255)                                                                      cATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGAATGGGCATCTGCGAGATGTTTTCCAGAAACg                                                                       >  4:111525/1‑149 (MQ=255)                                                                           ccGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATg                                                                  >  1:129220/1‑149 (MQ=255)                                                                                   cTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAg                                                          >  6:81103/1‑149 (MQ=255)                                                                                   cTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAg                                                          <  4:148283/149‑1 (MQ=255)                                                                                    tGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAgc                                                         >  4:114187/1‑149 (MQ=255)                                                                                         tACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGATGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGcggcgg                                                    >  1:308308/1‑149 (MQ=255)                                                                                         tACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGcggcgg                                                    >  8:165228/1‑149 (MQ=255)                                                                                            aaCGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAAc                                                                        <  8:28216/126‑1 (MQ=255)                                                                                            aaCGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAAc                                                                        >  7:28216/1‑126 (MQ=255)                                                                                              cggacggTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTgg                                               >  4:361919/1‑149 (MQ=255)                                                                                              cggacggTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTgg                                               >  2:131320/1‑149 (MQ=255)                                                                                                       aTCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCg                                      <  2:129220/149‑1 (MQ=255)                                                                                                           ggTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGcc                                  >  6:328290/1‑149 (MQ=255)                                                                                                           ggTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGcc                                  <  3:361919/149‑1 (MQ=255)                                                                                                           ggTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGc                                   >  5:398191/1‑148 (MQ=255)                                                                                                           ggTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGc                                   <  6:398191/148‑1 (MQ=255)                                                                                                             ttgttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAg                                >  4:173832/1‑149 (MQ=255)                                                                                                             ttgttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAg                                >  7:128893/1‑149 (MQ=255)                                                                                                             ttgttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAg                                >  5:247736/1‑149 (MQ=255)                                                                                                                ttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCtt                             <  2:264438/149‑1 (MQ=255)                                                                                                                  gCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGTCTTGGCCGCTGGCGAGCCAGCttt                            <  2:232766/148‑1 (MQ=255)                                                                                                                  gCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTg                           >  3:310267/1‑149 (MQ=255)                                                                                                                   cGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTgg                          <  6:151866/149‑1 (MQ=255)                                                                                                                    gaacacaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGTCTTGGCCGCTGGCGAGCCAGCTTTGGc                         <  1:237482/146‑1 (MQ=255)                                                                                                                    gACCACAGCACCACGGCAAAGCCGATGGCAACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCCGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGc                         >  7:33266/1‑149 (MQ=255)                                                                                                                       cacaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCggg                      <  8:334599/149‑1 (MQ=255)                                                                                                                        acaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgggg                     >  4:195591/1‑149 (MQ=255)                                                                                                                        acaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgggg                     <  3:114187/149‑1 (MQ=255)                                                                                                                        acaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgggg                     <  4:310267/149‑1 (MQ=255)                                                                                                                         caGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCggggg                    >  1:98188/1‑149 (MQ=255)                                                                                                                          aGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGc                   <  3:173832/149‑1 (MQ=255)                                                                                                                           gCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCg                  >  4:336127/1‑149 (MQ=255)                                                                                                                             accacGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGtt                >  1:392558/1‑149 (MQ=255)                                                                                                                               cacGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCt                                          <  8:291118/121‑1 (MQ=255)                                                                                                                               cacGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCt                                          >  7:291118/1‑121 (MQ=255)                                                                                                                                acGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTc             <  6:63886/149‑1 (MQ=255)                                                                                                                                  ggCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTcga           >  8:40966/1‑149 (MQ=255)                                                                                                                                       aGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACt      <  2:392558/149‑1 (MQ=255)                                                                                                                                          cGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCa                                 >  7:337512/1‑119 (MQ=255)                                                                                                                                          cGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCa                                 <  8:337512/119‑1 (MQ=255)                                                                                                                                           gATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCtt  >  7:208679/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                CCCCGAGTTGGGCTCCACGTTATAGGGGATGTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTT  >  NC_002947/4960177‑4960463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.