New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4960320 =	73 (1.150)	5 (0.080)	4/260	NT	6.8%	coding (151/1779 nt)	fliF	flagellar M‑ring protein
	?	NC_002947	4960368 =	66 (1.060)					coding (103/1779 nt)	fliF	flagellar M‑ring protein

GTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTAC  >  NC_002947/4960225‑4960516                                                                                                                                                |                                                                                                                                                     gtCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCt                                                                                                                                                 <  1:247094/149‑1 (MQ=255)    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACATCGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGGATCTGCg                                                                                                                                              <  6:12858/149‑1 (MQ=255)    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGc                                                                                                                                               <  7:214721/148‑1 (MQ=255)    cATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGc                                                                                                                                               >  7:334599/1‑148 (MQ=255)     gtcgtcgaaaacgcccccgccaaagctggctcgccagcggccaagccgccgctgtttggcatggcgtttctggaaaacatctcgcagatgcCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGc                                                                                                                                               <  1:375983‑M1/56‑1 (MQ=255)     aTGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGc                                                                                                                                               >  5:151866/1‑147 (MQ=255)     aTGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCga                                                                                                                                             <  6:57562/149‑1 (MQ=255)        gtcgaaaacgcccccgccaaagctggctcgccagcggccaagccgccgctgtttggcatggcgtttctggaaaacatctcgcagatgcCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGAt                                                                                                                                          >  2:375983‑M1/89‑149 (MQ=255)          cTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGt                                                                                                                                        >  1:31856/1‑149 (MQ=255)             gttGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGttt                                                                                                                                      <  4:26157/147‑1 (MQ=255)                      cATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGAATGGGCATCTGCGAGATGTTTTCCAGAAACg                                                                                                                            >  4:111525/1‑149 (MQ=255)                           ccGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATg                                                                                                                       >  1:129220/1‑149 (MQ=255)                                   cTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAg                                                                                                               <  4:148283/149‑1 (MQ=255)                                   cTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAg                                                                                                               >  6:81103/1‑149 (MQ=255)                                    tGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAgc                                                                                                              >  4:114187/1‑149 (MQ=255)                                         tACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGATGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGcggcgg                                                                                                         >  1:308308/1‑149 (MQ=255)                                         tACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGcggcgg                                                                                                         >  8:165228/1‑149 (MQ=255)                                            aaCGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAAc                                                                                                                             <  8:28216/126‑1 (MQ=255)                                            aaCGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAAc                                                                                                                             >  7:28216/1‑126 (MQ=255)                                              cggacggTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTgg                                                                                                    >  2:131320/1‑149 (MQ=255)                                              cggacggTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTgg                                                                                                    >  4:361919/1‑149 (MQ=255)                                                       aTCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCg                                                                                           <  2:129220/149‑1 (MQ=255)                                                           ggTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGcc                                                                                       >  6:328290/1‑149 (MQ=255)                                                           ggTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGcc                                                                                       <  3:361919/149‑1 (MQ=255)                                                           ggTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGc                                                                                        >  5:398191/1‑148 (MQ=255)                                                           ggTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGc                                                                                        <  6:398191/148‑1 (MQ=255)                                                             ttgttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAg                                                                                     >  4:173832/1‑149 (MQ=255)                                                             ttgttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAg                                                                                     >  5:247736/1‑149 (MQ=255)                                                             ttgttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAg                                                                                     >  7:128893/1‑149 (MQ=255)                                                                ttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCtt                                                                                  <  2:264438/149‑1 (MQ=255)                                                                  gCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGTCTTGGCCGCTGGCGAGCCAGCttt                                                                                 <  2:232766/148‑1 (MQ=255)                                                                  gCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTg                                                                                >  3:310267/1‑149 (MQ=255)                                                                   cGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTgg                                                                               <  6:151866/149‑1 (MQ=255)                                                                    gaacacaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGTCTTGGCCGCTGGCGAGCCAGCTTTGGc                                                                              <  1:237482/146‑1 (MQ=255)                                                                    gACCACAGCACCACGGCAAAGCCGATGGCAACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCCGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGc                                                                              >  7:33266/1‑149 (MQ=255)                                                                       cacaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCggg                                                                           <  8:334599/149‑1 (MQ=255)                                                                        acaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgggg                                                                          <  3:114187/149‑1 (MQ=255)                                                                        acaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgggg                                                                          >  4:195591/1‑149 (MQ=255)                                                                        acaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgggg                                                                          <  4:310267/149‑1 (MQ=255)                                                                         caGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCggggg                                                                         >  1:98188/1‑149 (MQ=255)                                                                          aGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGc                                                                        <  3:173832/149‑1 (MQ=255)                                                                           gCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCg                                                                       >  4:336127/1‑149 (MQ=255)                                                                             accacGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGtt                                                                     >  1:392558/1‑149 (MQ=255)                                                                               cacGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCt                                                                                               >  7:291118/1‑121 (MQ=255)                                                                               cacGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCt                                                                                               <  8:291118/121‑1 (MQ=255)                                                                                acGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTc                                                                  <  6:63886/149‑1 (MQ=255)                                                                                  ggCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTcga                                                                >  8:40966/1‑149 (MQ=255)                                                                                   atctcgcagatgcccatgctgcgccagatcggcctcctggtcggcctggcggccagcgtggGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTcgac                                                               >  2:375983‑M2/62‑149 (MQ=255)                                                                                       aGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACt                                                           <  2:392558/149‑1 (MQ=255)                                                                                        gcagatgcccatgctgcgccagatcggcctcctggtcggcctggcggccagcgtggGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCgacgac                                                            <  1:375983‑M2/91‑1 (MQ=255)                                                                                          cGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCa                                                                                      <  8:337512/119‑1 (MQ=255)                                                                                          cGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCa                                                                                      >  7:337512/1‑119 (MQ=255)                                                                                           gATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCtt                                                       >  7:208679/1‑149 (MQ=255)                                                                                                ccatgctgcgccagatcggcctcctggtcggcctggcggccagcgtggGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGc                                                   >  3:81629‑M2/49‑148 (MQ=255)                                                                                                ccatgctgcgccagatcggcctcctggtcggcctggcggccagcgtggGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGc                                                   >  7:315235‑M2/49‑148 (MQ=255)                                                                                                  ACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCAt                                                <  1:84851‑M1/149‑1 (MQ=255)                                                                                                    gCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATgg                                              <  3:336127/149‑1 (MQ=255)                                                                                                    gCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATgg                                              <  3:111525/149‑1 (MQ=255)                                                                                                    gCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATgg                                              <  2:84851/149‑1 (MQ=255)                                                                                                          ccagatcggcctcctggtcggcctggcggccagcgtggGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACa                                        <  8:315235‑M2/111‑1 (MQ=255)                                                                                                             cAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATcc                                     <  7:165228/149‑1 (MQ=255)                                                                                                               ggCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGt                                   >  2:294639/1‑149 (MQ=255)                                                                                                                gCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTc                                  <  3:195591/149‑1 (MQ=255)                                                                                                                gCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTc                                  >  2:237529/1‑149 (MQ=255)                                                                                                                 ccGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTcc                                 <  2:31856/149‑1 (MQ=255)                                                                                                                  cGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACACCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCt                                >  6:15701/1‑149 (MQ=255)                                                                                                                   gACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTc                               <  1:131320/149‑1 (MQ=255)                                                                                                                       aggaggCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAAc                           >  7:66511/1‑149 (MQ=255)                                                                                                                            gCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCa                      >  3:363471/1‑149 (MQ=255)                                                                                                                              cGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATc                    >  3:16986/1‑149 (MQ=255)                                                                                                                                     gcgcAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGc                 <  8:208679/145‑1 (MQ=255)                                                                                                                                     gcgcAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCatga             >  4:231544/1‑149 (MQ=255)                                                                                                                                       gcagcaTGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGGTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCatgatg           >  4:237548/1‑149 (MQ=255)                                                                                                                                       gcagcaTGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCatgatg           >  4:130401/1‑149 (MQ=255)                                                                                                                                         agcaTGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTc         <  1:237529/149‑1 (MQ=255)                                                                                                                                           caTGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCt       >  5:188147/1‑149 (MQ=255)                                                                                                                                                gCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTAc  >  7:8203/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                     GTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTAC  >  NC_002947/4960225‑4960516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.