New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5199250	66 (1.040)	6 (0.100)	6/256	NT	8.8%	coding (537/912 nt)	PP_4579	LysR family transcriptional regulator
	?	NC_002947	= 5199274	61 (1.000)					coding (561/912 nt)	PP_4579	LysR family transcriptional regulator

CTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGT  >  NC_002947/5199103‑5199398                                                                                                                                                      |                                                                                                                                                     cTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGt                                                                                                                                                     >  8:134600/1‑149 (MQ=255)  ttGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTc                                                                                                                                                    >  4:56241/1‑149 (MQ=255)      gcgAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTg                                                                                                                                                <  4:53854/149‑1 (MQ=255)        gAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGc                                                                                                                                              <  6:250497/149‑1 (MQ=255)        gAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAACACCGGGACTATGCGctcgcgcc                                                                                                                                              >  1:375198‑M1/1‑141 (MQ=255)         atcagcTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGAGGTGGTGGCCGCAGGCGCCCGCCAGCACCGGGACTATGCGTCGCTGGc                                                                                                                                              <  1:91249/147‑1 (MQ=255)          gcagcTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGcc                                                                                                                                             >  2:308119/1‑148 (MQ=255)          gcagcTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCg                                                                                                                                            <  1:8603/149‑1 (MQ=255)             gcTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGcc                                                                                                                                             <  2:30593/145‑1 (MQ=255)             gcTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGcc                                                                                                                                             >  1:30593/1‑145 (MQ=255)                 cAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTgg                                                                                                                                     <  6:41245/149‑1 (MQ=255)                 cAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTg                                                                                                                                      <  8:28258/148‑1 (MQ=255)                  aGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTggg                                                                                                                                    >  3:134386/1‑149 (MQ=255)                       ggCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCTAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGa                                                                                                                               <  7:63840/149‑1 (MQ=255)                         cTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGc                                                                                                                             >  1:27506‑M2/1‑148 (MQ=255)                         cTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGc                                                                                                                             >  6:166118‑M2/1‑148 (MQ=255)                         cTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGc                                                                                                                             <  2:124973‑M2/149‑2 (MQ=255)                              ttGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgcat                                                                                                                         <  6:182260‑M2/148‑6 (MQ=255)                                gACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGATCCCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGcatca                                                                                                                       >  1:273945/1‑149 (MQ=255)                                gACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGcatcat                                                                                                                      >  2:362916/1‑149 (MQ=255)                                gACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGcatca                                                                                                                       <  8:90861/148‑1 (MQ=255)                                gACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGcatc                                                                                                                        <  4:391092/147‑1 (MQ=255)                                gACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAACACCGGGACTATGCGctcgcgcccaagttcggccagcgacgcata                                                                                                                        <  2:375198‑M1/147‑31 (MQ=255)                                 aCGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGctcgcgcccaagttcggccagcgacgcatagtc                                                                                                                     <  3:204274‑M1/149‑34 (MQ=255)                                 aCGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGCACTTGGGCGCGAGCGcatcat                                                                                                                      >  2:321315/1‑148 (MQ=255)                                    ttATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGctcgcgcccaagttcggccagcgacgcatagtcccg                                                                                                                  <  6:355086‑M1/149‑37 (MQ=255)                                    ttATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCAcc                                                                                                                  >  4:190947/1‑149 (MQ=255)                                       tCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTtc                                                                                                               >  1:6240/1‑149 (MQ=255)                                           gCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTtct                                                                                                              <  1:61573/146‑1 (MQ=255)                                           gCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCg                                                                                                            <  3:346518/148‑1 (MQ=255)                                           gCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCg                                                                                                            >  4:236762/1‑148 (MQ=255)                                                   aCTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgc                                                                                                                           <  1:78559‑M2/125‑4 (MQ=255)                                                   aCTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgc                                                                                                                           >  2:78559‑M2/1‑122 (MQ=255)                                                              gAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCAc                                                                                          >  7:144423/1‑147 (MQ=255)                                                              gAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCAc                                                                                          >  1:264501/1‑147 (MQ=255)                                                                gCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCag                                                                                       >  5:311503/1‑148 (MQ=255)                                                                 cAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCag                                                                                       >  5:161864/1‑147 (MQ=255)                                                                  aaTCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCaggag                                                                                    >  1:18665/1‑149 (MQ=255)                                                                   aTCGAG‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGCGCTCATCATCACCTTCTCGAAGAATTCACGCCCGCACCaggagg                                                                                   >  6:178107/1‑149 (MQ=255)                                                                           cGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGa                                                                             <  2:273945/148‑1 (MQ=255)                                                                            gCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGc                                                                           >  6:381715/1‑149 (MQ=255)                                                                                  tCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGctcgcgcccaagttcggccagcgacgcat                                                                                                                         >  3:356408‑M1/1‑68 (MQ=255)                                                                                  tCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGctcgcgcccaagttcggccagcgacgcat                                                                                                                         <  4:356408‑M1/97‑30 (MQ=255)                                                                                    gACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCa                                                                   <  6:219360/149‑1 (MQ=255)                                                                                              gCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCgggg                                                         <  8:144423/149‑1 (MQ=255)                                                                                              gCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCgggg                                                         >  6:179018/1‑149 (MQ=255)                                                                                              gCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCgggg                                                         <  1:207470/149‑1 (MQ=255)                                                                                               cTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCggggg                                                        <  1:308119/149‑1 (MQ=255)                                                                                                  cccAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACATTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGc                                                       <  6:117376/147‑1 (MQ=255)                                                                                                    cAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCagag                                                   >  1:131245/1‑149 (MQ=255)                                                                                                     aaTGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGTTGAGCTTGCTGCAGGCTGCGGGGGCAGAgg                                                  >  2:166986/1‑149 (MQ=255)                                                                                                     aaTGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAgg                                                  >  2:287450/1‑149 (MQ=255)                                                                                                     aaTGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAgg                                                  <  5:48175/149‑1 (MQ=255)                                                                                                            tG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACg                                           >  7:171460/1‑149 (MQ=255)                                                                                                                gtggtgGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGtt                                        <  4:134386/149‑1 (MQ=255)                                                                                                                gtggtgGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGtt                                        <  2:131245/149‑1 (MQ=255)                                                                                                                gtggtgGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAACAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGtt                                        <  1:287450/149‑1 (MQ=255)                                                                                                                   gtggCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGCGCGCATCATCACCTTCTCGAAGAATTCACGGACGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGaa                                     >  3:79389/1‑149 (MQ=255)                                                                                                                   gtggCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCg                                                                                             <  1:125497/93‑1 (MQ=255)                                                                                                                   gtggCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCg                                                                                             >  2:125497/1‑93 (MQ=255)                                                                                                                    tggCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAAt                                    >  8:169962/1‑149 (MQ=255)                                                                                                                       ccGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgt                                 <  5:182260/149‑1 (MQ=255)                                                                                                                       ccGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgt                                 <  1:362916/149‑1 (MQ=255)                                                                                                                       ccGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgt                                 <  3:190947/149‑1 (MQ=255)                                                                                                                         gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGTTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                               <  1:166986/149‑1 (MQ=255)                                                                                                                         gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                               <  5:8210/149‑1 (MQ=255)                                                                                                                         gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                               <  3:56241/149‑1 (MQ=255)                                                                                                                         gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                               <  1:162015/149‑1 (MQ=255)                                                                                                                         gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                               <  7:134600/149‑1 (MQ=255)                                                                                                                               gcCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTc                         >  7:272617/1‑149 (MQ=255)                                                                                                                                  caccaGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGcac                                               <  7:158033/124‑1 (MQ=255)                                                                                                                                  caccaGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGcac                                               >  8:158033/1‑124 (MQ=255)                                                                                                                                  caccaGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGAAGAGGCACCACGGATCAATTGTGTGAACTCgtt                      >  4:269111/1‑147 (MQ=255)                                                                                                                                   accaGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTg                     >  1:212915/1‑149 (MQ=255)                                                                                                                                     caGCACCGGGACTATGTGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTggc                   >  7:159819/1‑149 (MQ=255)                                                                                                                                     caGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTggc                   >  8:231936/1‑149 (MQ=255)                                                                                                                                         aCCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTggcggc                >  7:42738/1‑148 (MQ=255)                                                                                                                                           cGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataa             <  6:355086‑M2/149‑114 (MQ=255)                                                                                                                                           cGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTGGAATTGTGTGAACTCGGTGGCGGCGAt             >  3:203766/1‑149 (MQ=255)                                                                                                                                            gggACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGAt             >  3:23885/1‑148 (MQ=255)                                                                                                                                              gACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataacgt          <  3:204274‑M2/149‑117 (MQ=255)                                                                                                                                                 tATGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgttggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataacgtc         <  2:375198‑M2/147‑118 (MQ=255)                                                                                                                                                 tATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTAccc        >  7:313963/1‑148 (MQ=255)                                                                                                                                                  aTGCGctcgcgcccaagttcggccagcgacgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataacgtcaa       <  6:182260‑M1/148‑144 (MQ=255)                                                                                                                                                  aTGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcga                                                          >  3:356408‑M2/1‑29 (MQ=255)                                                                                                                                                  aTGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcga                                                          <  4:356408‑M2/97‑69 (MQ=255)                                                                                                                                                   tGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCTAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCgc      <  1:124973/148‑2 (MQ=255)                                                                                                                                                   tGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTAccc        <  8:313963/146‑1 (MQ=255)                                                                                                                                                   tGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGc     >  5:118976/1‑149 (MQ=255)                                                                                                                                                    gcgctcgcgcccaagttcggccagcgacgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagt                            <  1:78559‑M1/125‑123 (MQ=255)                                                                                                                                                    gcgctcgcgcccaagttcggccagcgacgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagt                            >  2:78559‑M1/1‑3 (MQ=255)                                                                                                                                                      gctcgcgcccaagttcggccagcgacgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataacgtcaagaaag  >  1:27506‑M1/1‑1 (MQ=255)                                                                                                                                                      gctcgcgcccaagttcggccagcgacgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataacgtcaagaaag  <  2:124973‑M1/149‑149 (MQ=255)                                                                                                                                                      gctcgcgcccaagttcggccagcgacgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataacgtcaagaaag  >  6:166118‑M1/1‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTG‑GGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGT  >  NC_002947/5199103‑5199398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.