New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5199250	66 (1.040)	6 (0.100)	6/256	NT	8.8%	coding (537/912 nt)	PP_4579	LysR family transcriptional regulator
	?	NC_002947	= 5199274	61 (1.000)					coding (561/912 nt)	PP_4579	LysR family transcriptional regulator

CTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTGCGCGACGGCTTTGGCA  >  NC_002947/5199127‑5199416                                                                                                                                                     |                                                                                                                                               cTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGc                                                                                                                                               >  6:166118‑M2/1‑148 (MQ=255) cTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGc                                                                                                                                               <  2:124973‑M2/149‑2 (MQ=255) cTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGc                                                                                                                                               >  1:27506‑M2/1‑148 (MQ=255)      ttGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgcat                                                                                                                                           <  6:182260‑M2/148‑6 (MQ=255)        gACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGATCCCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGcatca                                                                                                                                         >  1:273945/1‑149 (MQ=255)        gACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGcatcat                                                                                                                                        >  2:362916/1‑149 (MQ=255)        gACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGcatca                                                                                                                                         <  8:90861/148‑1 (MQ=255)        gACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGcatc                                                                                                                                          <  4:391092/147‑1 (MQ=255)         aCGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGCACTTGGGCGCGAGCGcatcat                                                                                                                                        >  2:321315/1‑148 (MQ=255)            ttATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCAcc                                                                                                                                    >  4:190947/1‑149 (MQ=255)               tCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTtc                                                                                                                                 >  1:6240/1‑149 (MQ=255)                   gCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTtct                                                                                                                                <  1:61573/146‑1 (MQ=255)                   gCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCg                                                                                                                              >  4:236762/1‑148 (MQ=255)                   gCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCg                                                                                                                              <  3:346518/148‑1 (MQ=255)                           aCTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgc                                                                                                                                             <  1:78559‑M2/125‑4 (MQ=255)                           aCTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgc                                                                                                                                             >  2:78559‑M2/1‑122 (MQ=255)                                      gAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCAc                                                                                                            >  1:264501/1‑147 (MQ=255)                                      gAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCAc                                                                                                            >  7:144423/1‑147 (MQ=255)                                        gCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCag                                                                                                         >  5:311503/1‑148 (MQ=255)                                         cAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCag                                                                                                         >  5:161864/1‑147 (MQ=255)                                          aaTCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCaggag                                                                                                      >  1:18665/1‑149 (MQ=255)                                           aTCGAG‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGCGCTCATCATCACCTTCTCGAAGAATTCACGCCCGCACCaggagg                                                                                                     >  6:178107/1‑149 (MQ=255)                                                   cGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGa                                                                                               <  2:273945/148‑1 (MQ=255)                                                    gCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGc                                                                                             >  6:381715/1‑149 (MQ=255)                                                            gACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCa                                                                                     <  6:219360/149‑1 (MQ=255)                                                                      gCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCgggg                                                                           <  1:207470/149‑1 (MQ=255)                                                                      gCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCgggg                                                                           >  6:179018/1‑149 (MQ=255)                                                                      gCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCgggg                                                                           <  8:144423/149‑1 (MQ=255)                                                                       cTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCggggg                                                                          <  1:308119/149‑1 (MQ=255)                                                                          cccAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACATTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGc                                                                         <  6:117376/147‑1 (MQ=255)                                                                            cAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCagag                                                                     >  1:131245/1‑149 (MQ=255)                                                                             aaTGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGTTGAGCTTGCTGCAGGCTGCGGGGGCAGAgg                                                                    >  2:166986/1‑149 (MQ=255)                                                                             aaTGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAgg                                                                    >  2:287450/1‑149 (MQ=255)                                                                             aaTGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAgg                                                                    <  5:48175/149‑1 (MQ=255)                                                                                    tGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACg                                                             >  7:171460/1‑149 (MQ=255)                                                                                       gtggtgGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGtt                                                          <  2:131245/149‑1 (MQ=255)                                                                                       gtggtgGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGtt                                                          <  4:134386/149‑1 (MQ=255)                                                                                       gtggtgGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAACAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGtt                                                          <  1:287450/149‑1 (MQ=255)                                                                                          gtggCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGCGCGCATCATCACCTTCTCGAAGAATTCACGGACGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGaa                                                       >  3:79389/1‑149 (MQ=255)                                                                                          gtggCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCg                                                                                                               <  1:125497/93‑1 (MQ=255)                                                                                          gtggCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCg                                                                                                               >  2:125497/1‑93 (MQ=255)                                                                                           tggCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAAt                                                      >  8:169962/1‑149 (MQ=255)                                                                                              ccGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgt                                                   <  1:362916/149‑1 (MQ=255)                                                                                              ccGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgt                                                   <  5:182260/149‑1 (MQ=255)                                                                                              ccGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgt                                                   <  3:190947/149‑1 (MQ=255)                                                                                                gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGTTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                                                 <  1:166986/149‑1 (MQ=255)                                                                                                gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                                                 <  3:56241/149‑1 (MQ=255)                                                                                                gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                                                 <  5:8210/149‑1 (MQ=255)                                                                                                gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                                                 <  7:134600/149‑1 (MQ=255)                                                                                                gCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATtgtgt                                                 <  1:162015/149‑1 (MQ=255)                                                                                                      gcCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTc                                           >  7:272617/1‑149 (MQ=255)                                                                                                         caccaGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGcac                                                                 >  8:158033/1‑124 (MQ=255)                                                                                                         caccaGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGcac                                                                 <  7:158033/124‑1 (MQ=255)                                                                                                         caccaGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGAAGAGGCACCACGGATCAATTGTGTGAACTCgtt                                        >  4:269111/1‑147 (MQ=255)                                                                                                          accaGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTg                                       >  1:212915/1‑149 (MQ=255)                                                                                                            caGCACCGGGACTATGTGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTggc                                     >  7:159819/1‑149 (MQ=255)                                                                                                            caGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTggc                                     >  8:231936/1‑149 (MQ=255)                                                                                                                aCCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTggcggc                                  >  7:42738/1‑148 (MQ=255)                                                                                                                  cGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataa                               <  6:355086‑M2/149‑114 (MQ=255)                                                                                                                  cGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTGGAATTGTGTGAACTCGGTGGCGGCGAt                               >  3:203766/1‑149 (MQ=255)                                                                                                                   gggACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGAt                               >  3:23885/1‑148 (MQ=255)                                                                                                                     gACTATGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataacgt                            <  3:204274‑M2/149‑117 (MQ=255)                                                                                                                        tATGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgttggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataacgtc                           <  2:375198‑M2/147‑118 (MQ=255)                                                                                                                        tATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTAccc                          >  7:313963/1‑148 (MQ=255)                                                                                                                         aTGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcga                                                                            <  4:356408‑M2/97‑69 (MQ=255)                                                                                                                         aTGCGTCGCTGGCCGAACTTGGGCGCGAGcgcatagtcccggtgctggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcga                                                                            >  3:356408‑M2/1‑29 (MQ=255)                                                                                                                          tGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCTAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCgc                        <  1:124973/148‑2 (MQ=255)                                                                                                                          tGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTAccc                          <  8:313963/146‑1 (MQ=255)                                                                                                                          tGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGc                       >  5:118976/1‑149 (MQ=255)                                                                                                                                gCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTgc                 <  7:11014/149‑1 (MQ=255)                                                                                                                                    gCCTAACTTGCGCGGGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGGAGACGCACCACGGTTGATTTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTgcgc               <  3:269111/147‑1 (MQ=255)                                                                                                                                      cGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTGCGCGACg           >  7:122027/1‑149 (MQ=255)                                                                                                                                        aaCTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTGCGCGACGGc         <  7:231936/149‑1 (MQ=255)                                                                                                                                             gggCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTGCGCGACGGCttt      <  8:171460/147‑1 (MQ=255)                                                                                                                                             gggCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTGCGCGACGGCttt      <  2:18665/147‑1 (MQ=255)                                                                                                                                             gggCGCGAGAGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTGCGCGACGGCTTTg     <  8:272617/148‑1 (MQ=255)                                                                                                                                              ggCGCGAGcgcatagtcccggtgttggtgggcgcctgcggccaccacccagcccattgggtagcgtgccaggtcgaggctgcggatcgattgctcgcgcagcaagtcggtctgcaagataacgtcaagaaagcccttctgcagctgctc   >  1:375198‑M2/1‑8 (MQ=255)                                                                                                                                               gcgcGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTGCGCGACGGCTTTGGCa  >  5:63667/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                               CTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGAT‑CCGCAGCCTCGACCTGGCACGCTACCCAATGGGCTGGGTGGTGGCCGCAGGCGCCCACCAGCACCGGGACTATGCGTCGCTGGCCGAACTTGGGCGCGAGCGCATCATCACCTTCTCGAAGAATTCACGGCCGCACCAGGAGGTGCTGAGCTTGCTGCAGGCTGCGGGGGCAGAGGCACCACGGTTGAATTGTGTGAACTCGGTGGCGGCGATTACCCGGCTGTTGCGCGACGGCTTTGGCA  >  NC_002947/5199127‑5199416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.