New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5472435 =	76 (1.200)	4 (0.060)	4/258	NT	5.9%	coding (5/519 nt) coding (384/420 nt)	rlmH rsfS	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH ribosomal silencing factor RsfS
	?	NC_002947	5472494 =	53 (0.860)					coding (325/420 nt)	rsfS	ribosomal silencing factor RsfS

CAGCGACAGCTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCT  >  NC_002947/5472290‑5472581                                                                                                                                                  |                                                                                                                                                   cgtgaagcagtcaaggccaagggcgcccagccactgggtgaagaaggcaagggcgacagcgactgggtgctgctggacctgaacgacgtcatcgtgcacatgatgaccgccgctgcccgccagttctacgaccttgagcgtctgtGGCa                                                                                                                                                 >  3:216294‑M1/146‑149 (MQ=255) cAGCGACAGCTCGGCGGGCAGGCGCTTGGCATATTCATGCCGGCGTTCCTGGCCCCACTGCGGCATGCGCGAGCCGACCCCAATCGGGCGCTCACGCACCGCGCTTACCTTATTCGGGGGCTTTGAGCTTGTCGGAGTAGTCGTggg                                                                                                                                                   >  8:295377/1‑147 (MQ=255) cAGCGACAGCTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCa                                                                                                                                                 <  3:341191/149‑1 (MQ=255)     gACAGCTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGt                                                                                                                                             >  5:264883/1‑149 (MQ=255)     gACAGCTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGt                                                                                                                                             >  6:456/1‑149 (MQ=255)        aGCTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCg                                                                                                                                          <  5:256779/149‑1 (MQ=255)         gCTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCgg                                                                                                                                         >  3:158728/1‑149 (MQ=255)          gtcaatgcctagggcgcccagccactgtgtgaagaaggcaagggcgacagcgactgggtgctgctggacctgaaggacgtgatcgtgcacatgatgagcgccgctgcccgccagttctacgaccttgagcgtctgtGGcatggtgccgt                                                                                                                                        >  4:85875‑M1/137‑144 (MQ=255)          cTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCggg                                                                                                                                        <  1:226508/149‑1 (MQ=255)          cTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCg                                                                                                                                          <  6:340301/147‑1 (MQ=255)          cTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCg                                                                                                                                          >  5:340301/1‑147 (MQ=255)           tCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCggg                                                                                                                                        >  6:21141/1‑148 (MQ=255)           tCGGCGGCCAGGCGCTTGGCATATTCATGCCAGCCTACCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTGTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGc                                                                                                                                       >  3:89682/1‑149 (MQ=255)            cggcggGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCt                                                                                                                                      >  1:380693/1‑149 (MQ=255)             ggcggGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCggg                                                                                                                                        <  5:21141/146‑1 (MQ=255)              gcggGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCtgt                                                                                                                                    <  6:399624/149‑1 (MQ=255)               cggGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCtgtg                                                                                                                                   <  2:60712/149‑1 (MQ=255)               cggGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCtgtg                                                                                                                                   <  4:158728/149‑1 (MQ=255)                gggCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTgtgg                                                                                                                                  <  3:311480/149‑1 (MQ=255)                gggCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTgtgg                                                                                                                                  <  3:173747/149‑1 (MQ=255)                  gCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTgtggtg                                                                                                                                >  3:240065/1‑149 (MQ=255)                    aGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCt                                                                                                                              >  2:258544/1‑149 (MQ=255)                      gcgcTTGGCATATTCATGCCAGCCTTCCTCGCCCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTg                                                                                                                            >  4:89059/1‑149 (MQ=255)                      gcgcTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTg                                                                                                                            <  6:264883/149‑1 (MQ=255)                       cgcTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGc                                                                                                                           <  1:142724/149‑1 (MQ=255)                        gcTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGTTCCGGGCTGTGGTGCTTGcc                                                                                                                          <  2:188192/149‑1 (MQ=255)                         gcccagccactgggtgaagaaggcaagggcgacagcgactgggtgctgctggacctgaacgacgtcatcgtgcacatgatgaccgccgctgcccgccagttctacgaccttgagcgtctgtGGCATGGTCCGGGCTGTGGTGCTTGCCa                                                                                                                         <  3:310598‑M1/28‑1 (MQ=255)                            ggCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATc                                                                                                                       <  4:196660/148‑1 (MQ=255)                               atatTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATcggcg                                                                                                                   >  4:217610/1‑149 (MQ=255)                                     aTGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACgg                                                                                                             <  3:89059/149‑1 (MQ=255)                                       gCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCTTGGTCCGGGCTGTGGTGCTTGCCCTCGGCGGCCCGGCt                                                                                                           >  4:357591/1‑149 (MQ=255)                                        ccAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTAATCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCt                                                                                                           <  3:357591/148‑1 (MQ=255)                                        ccAGCCTTCCTCGACCCACTTCGGCATCCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCATATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCtt                                                                                                          >  5:185057/1‑149 (MQ=255)                                          aGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTg                                                                                                        >  4:33554/1‑149 (MQ=255)                                           gCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGc                                                                                                       <  5:456/149‑1 (MQ=255)                                             cTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTc                                                                                                     <  5:374990/149‑1 (MQ=255)                                              ttCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCg                                                                                                    >  8:176154/1‑149 (MQ=255)                                              ttCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGACGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCg                                                                                                    >  1:311190/1‑149 (MQ=255)                                                ccTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGACGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCgg                                                                                                   <  2:311190/148‑1 (MQ=255)                                                      cccACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTg                                                                                            >  3:389503/1‑149 (MQ=255)                                                        cACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGc                                                                                           >  3:295210/1‑148 (MQ=255)                                                         cagcgactgggtgctgctggacctgaacgacgtcatcgtgcacatgatgaccgccgctgcccgccagttctacgaccttgagcgtctgtGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                         >  4:310598‑M1/90‑149 (MQ=255)                                                         aCTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                         <  7:136789/149‑1 (MQ=255)                                                         aCTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                         <  7:295377/149‑1 (MQ=255)                                                         aCTTCGGCAGGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                         <  8:333177/149‑1 (MQ=255)                                                           ttCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCcaca                                                                                       >  8:240831/1‑149 (MQ=255)                                                           ttCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCAGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                         >  6:368801/1‑147 (MQ=255)                                                               gCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACg                                                                                   >  6:318023/1‑149 (MQ=255)                                                                 aTGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCt                                                                                 <  4:240065/149‑1 (MQ=255)                                                                       tgctggacctgaacgacgtcatcgtgcacatgatgaccgccgctgcccgccagttctacgaccttgagcgtctgtGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAg                                                                                      >  4:36489‑M1/76‑138 (MQ=255)                                                                       tgctggacctgaacgacgtcatcgtgcacatgatgaccgccgctgcccgccagttctacgaccttgagcgtctgtGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAg                                                                                      <  3:36489‑M1/63‑1 (MQ=255)                                                                        aGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTc                                                                          <  5:374715/149‑1 (MQ=255)                                                                           cGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTa                                                                       <  5:318023/149‑1 (MQ=255)                                                                           cGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTa                                                                       <  1:41133/149‑1 (MQ=255)                                                                           cGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCATATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTa                                                                       <  6:42507/149‑1 (MQ=255)                                                                                  aaTCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCa                                                                               >  4:63340/1‑134 (MQ=255)                                                                                  aaTCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCa                                                                               <  3:63340/134‑1 (MQ=255)                                                                                    tCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCg                                                              >  4:184146/1‑149 (MQ=255)                                                                                       ggCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTCGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCggg                                                            >  4:87384/1‑148 (MQ=255)                                                                                        gcgcAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCa                                                          <  3:33554/149‑1 (MQ=255)                                                                                         cgcAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAg                                                         <  7:176154/149‑1 (MQ=255)                                                                                         cgcAGACGCACAGCGCTTTCCTTATTCGCGGTC‑TTGAGCTTGTCGGAGTACTAGTGGGCATGGTGCGGGGGGTGGTGGTTGGCATCGGCGGCACGGCGTTGGTAGGGACCCTGCCACAGCCGCTGAAGGTCGTAGCACTGGCGGGGAgc                                                        >  2:180996/1‑149 (MQ=255)                                                                                              aCGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAgcggcg                                                    <  1:317901/149‑1 (MQ=255)                                                                                              aCGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAgcggcg                                                    >  3:110151/1‑149 (MQ=255)                                                                                              aCGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCACAAGGACGTAGAAAAGGCGGGCAgcggcg                                                    >  8:57676/1‑149 (MQ=255)                                                                                                gCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGGCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGt                                                  >  5:332860/1‑149 (MQ=255)                                                                                                gCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGACTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGt                                                  >  3:182238/1‑149 (MQ=255)                                                                                                  acaGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGtca                                                >  2:248800/1‑149 (MQ=255)                                                                                                  acaGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGtca                                                <  7:240831/149‑1 (MQ=255)                                                                                                   caGCGCTTTCCTTATTCGCGGTCTTCGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGtcat                                               <  3:87384/149‑1 (MQ=255)                                                                                                                aTTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGa                                    <  1:248800/147‑1 (MQ=255)                                                                                                                aTTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGAt                                   <  1:357590/148‑1 (MQ=255)                                                                                                                aTTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCAGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGAt                                   <  5:368801/148‑1 (MQ=255)                                                                                                                 ttCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATg                                  <  6:326510/148‑1 (MQ=255)                                                                                                                 ttCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGa                                 <  3:217610/149‑1 (MQ=255)                                                                                                                        tCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGtt                          <  6:185057/149‑1 (MQ=255)                                                                                                                          tttGAGCTTGTAGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGTAGGCACGGCTTTGATCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGtt                          >  7:359433/1‑147 (MQ=255)                                                                                                                            tGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGTCAGCGGCGGTCATCATGTGCACGATGACGTCGTTc                         <  1:258544/146‑1 (MQ=255)                                                                                                                            tGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCa                        <  7:57676/147‑1 (MQ=255)                                                                                                                            tGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGACTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTc                         <  4:182238/146‑1 (MQ=255)                                                                                                                             gAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGAt                                   >  6:295967/1‑135 (MQ=255)                                                                                                                                cTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTc                    >  8:12294/1‑147 (MQ=255)                                                                                                                                   gTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCcag                 >  4:33109/1‑147 (MQ=255)                                                                                                                                        aGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCAcc          <  2:274879/149‑1 (MQ=255)                                                                                                                                             tCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGtcatc                                              <  6:240712/108‑1 (MQ=255)                                                                                                                                                tGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCt  <  1:180996/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CAGCGACAGCTCGGCGGGCAGGCGCTTGGCATATTCATGCCAGCCTTCCTCGACCCACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCT  >  NC_002947/5472290‑5472581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.