New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5472435 =	76 (1.200)	4 (0.060)	4/258	NT	5.9%	coding (5/519 nt) coding (384/420 nt)	rlmH rsfS	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH ribosomal silencing factor RsfS
	?	NC_002947	5472494 =	53 (0.860)					coding (325/420 nt)	rsfS	ribosomal silencing factor RsfS

ACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGGCGCCCTTGGCCTTGACTGCTTCACG  >  NC_002947/5472346‑5472638                                                                                                                                                     |                                                                                                                                                 cagcgactgggtgctgctggacctgaacgacgtcatcgtgcacatgatgaccgccgctgcccgccagttctacgaccttgagcgtctgtGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                                                                                  >  4:310598‑M1/90‑149 (MQ=255) aCTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                                                                                  <  7:295377/149‑1 (MQ=255) aCTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                                                                                  <  7:136789/149‑1 (MQ=255) aCTTCGGCAGGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                                                                                  <  8:333177/149‑1 (MQ=255)   ttCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCcaca                                                                                                                                                >  8:240831/1‑149 (MQ=255)   ttCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCAGCGGCACGGCTTTGCTCGGCACCCTGCca                                                                                                                                                  >  6:368801/1‑147 (MQ=255)       gCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACg                                                                                                                                            >  6:318023/1‑149 (MQ=255)         aTGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCt                                                                                                                                          <  4:240065/149‑1 (MQ=255)               tgctggacctgaacgacgtcatcgtgcacatgatgaccgccgctgcccgccagttctacgaccttgagcgtctgtGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAg                                                                                                                                               <  3:36489‑M1/63‑1 (MQ=255)               tgctggacctgaacgacgtcatcgtgcacatgatgaccgccgctgcccgccagttctacgaccttgagcgtctgtGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAg                                                                                                                                               >  4:36489‑M1/76‑138 (MQ=255)                aGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTc                                                                                                                                   <  5:374715/149‑1 (MQ=255)                   cGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTa                                                                                                                                <  1:41133/149‑1 (MQ=255)                   cGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTa                                                                                                                                <  5:318023/149‑1 (MQ=255)                   cGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCATATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTa                                                                                                                                <  6:42507/149‑1 (MQ=255)                          aaTCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCa                                                                                                                                        <  3:63340/134‑1 (MQ=255)                          aaTCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCa                                                                                                                                        >  4:63340/1‑134 (MQ=255)                            tCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCg                                                                                                                       >  4:184146/1‑149 (MQ=255)                               ggCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTCGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCggg                                                                                                                     >  4:87384/1‑148 (MQ=255)                                gcgcAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCa                                                                                                                   <  3:33554/149‑1 (MQ=255)                                 cgcAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAg                                                                                                                  <  7:176154/149‑1 (MQ=255)                                 cgcAGACGCACAGCGCTTTCCTTATTCGCGGTC‑TTGAGCTTGTCGGAGTACTAGTGGGCATGGTGCGGGGGGTGGTGGTTGGCATCGGCGGCACGGCGTTGGTAGGGACCCTGCCACAGCCGCTGAAGGTCGTAGCACTGGCGGGGAgc                                                                                                                 >  2:180996/1‑149 (MQ=255)                                      aCGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAgcggcg                                                                                                             >  3:110151/1‑149 (MQ=255)                                      aCGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAgcggcg                                                                                                             <  1:317901/149‑1 (MQ=255)                                      aCGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCACAAGGACGTAGAAAAGGCGGGCAgcggcg                                                                                                             >  8:57676/1‑149 (MQ=255)                                        gCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGGCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGt                                                                                                           >  5:332860/1‑149 (MQ=255)                                        gCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGACTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGt                                                                                                           >  3:182238/1‑149 (MQ=255)                                          acaGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGtca                                                                                                         <  7:240831/149‑1 (MQ=255)                                          acaGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGtca                                                                                                         >  2:248800/1‑149 (MQ=255)                                           caGCGCTTTCCTTATTCGCGGTCTTCGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGtcat                                                                                                        <  3:87384/149‑1 (MQ=255)                                                        aTTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGa                                                                                             <  1:248800/147‑1 (MQ=255)                                                        aTTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGAt                                                                                            <  1:357590/148‑1 (MQ=255)                                                        aTTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCAGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGAt                                                                                            <  5:368801/148‑1 (MQ=255)                                                         ttCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATg                                                                                           <  6:326510/148‑1 (MQ=255)                                                         ttCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGa                                                                                          <  3:217610/149‑1 (MQ=255)                                                                tCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGtt                                                                                   <  6:185057/149‑1 (MQ=255)                                                                  tttGAGCTTGTAGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGTAGGCACGGCTTTGATCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGtt                                                                                   >  7:359433/1‑147 (MQ=255)                                                                    tGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGTCAGCGGCGGTCATCATGTGCACGATGACGTCGTTc                                                                                  <  1:258544/146‑1 (MQ=255)                                                                    tGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCa                                                                                 <  7:57676/147‑1 (MQ=255)                                                                    tGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGACTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTc                                                                                  <  4:182238/146‑1 (MQ=255)                                                                     gAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGAt                                                                                            >  6:295967/1‑135 (MQ=255)                                                                        cTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTc                                                                             >  8:12294/1‑147 (MQ=255)                                                                           gTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCcag                                                                          >  4:33109/1‑147 (MQ=255)                                                                                aGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCAcc                                                                   <  2:274879/149‑1 (MQ=255)                                                                                     tCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGtcatc                                                                                                       <  6:240712/108‑1 (MQ=255)                                                                                      ctgtggcagggtgccgagcaaagccgtgccgccgatggcaagcaccacagcccggaccatgccACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCcagca                                                                        <  3:36489‑M2/75‑1 (MQ=255)                                                                                      ctgtggcagggtgccgagcaaagccgtgccgccgatggcaagcaccacagcccggaccatgccACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCcagca                                                                        >  4:36489‑M2/64‑138 (MQ=255)                                                                                        tGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCt                                                           <  1:180996/149‑1 (MQ=255)                                                                                         tggcagggtgccgagcaaagccgtgccgccgatggcaagcaccacagcccggaccatgccACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTg                                                          >  4:310598‑M2/61‑149 (MQ=255)                                                                                                gTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCt                                                   >  7:350049/1‑149 (MQ=255)                                                                                                gTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCt                                                   <  2:380693/149‑1 (MQ=255)                                                                                                 tCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCcag                                                                          >  4:145689/1‑125 (MQ=255)                                                                                                 tCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCcag                                                                          <  3:145689/125‑1 (MQ=255)                                                                                                            gtgCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAg                                                                >  6:397740/1‑124 (MQ=255)                                                                                                            gtgCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAg                                                                <  5:397740/124‑1 (MQ=255)                                                                                                              gCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCcttctt                                          <  4:120377/144‑1 (MQ=255)                                                                                                              gCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCcttctt                                          >  3:120377/1‑144 (MQ=255)                                                                                                               cTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGtt                                                                                   <  2:309116/102‑1 (MQ=255)                                                                                                               cTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGtt                                                                                   >  1:309116/1‑102 (MQ=255)                                                                                                                        ggcggcACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTgg                            <  8:350049/148‑1 (MQ=255)                                                                                                                         tggcaagcaccacagcccggaccatgccACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGgc                          <  3:310598‑M2/121‑1 (MQ=255)                                                                                                                              aCGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGGCGCCCt                     >  5:329968/1‑149 (MQ=255)                                                                                                                                   tttGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGCCATCATGTGCACGa                                                                                             >  8:230083/1‑72 (MQ=255)                                                                                                                                   tttGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGCCATCATGTGCACGa                                                                                             <  7:230083/72‑1 (MQ=255)                                                                                                                                       cTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGGCGCCCTTGGCCTTGa            <  6:332860/149‑1 (MQ=255)                                                                                                                                       cTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGGCGCCCTTGGCCTTGa            >  5:217026/1‑149 (MQ=255)                                                                                                                                        acggcaccatgccACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGCTCATCATGTGCACGATCACGTCCTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACACAGTGGCTGGGCGCCCTAGGCATTGAc           >  4:85875‑M2/14‑149 (MQ=255)                                                                                                                                            cACCCTGCCACAGTCTCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCGAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGGCGCCCTTGGCCTTGACTGCt       <  3:85875/149‑1 (MQ=255)                                                                                                                                              cccTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGGCGCCCTTGGCCTTGACTGCTTc     <  7:12294/149‑1 (MQ=255)                                                                                                                                                cTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTc                                                        <  6:175978/96‑1 (MQ=255)                                                                                                                                                cTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTc                                                        >  5:175978/1‑96 (MQ=255)                                                                                                                                                cTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGGCGCCCTTGGCCTTGACTGCTTCAc   <  3:33109/149‑1 (MQ=255)                                                                                                                                                 tgccACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGGCGCCCTTGGCCTTGACTGCTTCACg  >  3:216294‑M2/5‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 ACTTCGGCATGCGCGAGCCGACCGCAATCAGGCGCAGACGCACAGCGCTTTCCTTATTCGCGGTCTTTGAGCTTGTCGGAGTACTCGTGGGCATGGTCCGGGCTGTGGTGCTTGCCATCGGCGGCACGGCTTTGCTCGGCACCCTGCCACAGACGCTCAAGGTCGTAGAACTGGCGGGCAGCGGCGGTCATCATGTGCACGATGACGTCGTTCAGGTCCAGCAGCACCCAGTCGCTGTCGCCCTTGCCTTCTTCACCCAGTGGCTGGGCGCCCTTGGCCTTGACTGCTTCACG  >  NC_002947/5472346‑5472638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.