New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4979191 =	51 (0.800)	3 (0.050)	3/250	NT	5.4%	coding (231/786 nt)	flgG	flagellar basal‑body rod protein FlgG
	?	NC_002947	4979266 =	58 (0.970)					coding (156/786 nt)	flgG	flagellar basal‑body rod protein FlgG

ACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGCGACCCAAAGAGCCG  >  NC_002947/4979119‑4979414                                                                                                                                                    |                                                                                                                                                      aCCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCGCACGATACGCACGCCGGTACCGACCTGCAGGCGCTAGGGCAGCTCGCTGGCCTGGGTCGACTGGGCGCCAg                                                                                                                                                      >  8:87995/1‑149 (MQ=255)  tctcgaccaccggcttcaagcgtgatcgcgccgaattcgcagacctgctctaccagatcaagcgccagcctGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAgg                                                                                                                                                     >  1:44903‑M1/72‑149 (MQ=255)         cGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGgcgc                                                                                                                                              >  5:65625/1‑149 (MQ=255)         cGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGgcgc                                                                                                                                              <  5:171623/149‑1 (MQ=255)         cGTTGACTGCCATGTCCAGCGGGGTGGCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCGGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGgcgc                                                                                                                                              <  4:286063/149‑1 (MQ=255)             ggcttcaagcgtgatcgcgccgaattcgcagacctgctctaccagatcaagcgccagcctGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGa                                                                                                                                          >  6:324101‑M1/61‑149 (MQ=255)              aCTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGAt                                                                                                                                         <  4:262806/149‑1 (MQ=255)                  ccATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTgg                                                                                                                                     <  8:215886/149‑1 (MQ=255)                  ccATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTgg                                                                                                                                     >  5:32899/1‑149 (MQ=255)                    aTGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTa                                                                                                                                   <  2:65059/149‑1 (MQ=255)                     tGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTgg                                                                                                                                     >  7:224154/1‑146 (MQ=255)                      gTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTa                                                                                                                                   >  1:388012/1‑147 (MQ=255)                         cAGCGGGTTGTCGGGGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑c                                                                                                                              <  3:245075/148‑1 (MQ=255)                           gCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAgg                                                                                                                           >  8:31978/1‑149 (MQ=255)                                  gTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCg                                                                                                                     <  4:178445/148‑1 (MQ=255)                                   tCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGaa                                                                                                                   >  8:244217/1‑149 (MQ=255)                                    cGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAAt                                                                                                                  <  6:65625/149‑1 (MQ=255)                                       tggtTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCtt                                                                                                                                            >  2:350781/1‑121 (MQ=255)                                       tggtTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCtt                                                                                                                                            <  1:350781/121‑1 (MQ=255)                                         gtTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGgc                                                                                                             >  7:154300/1‑149 (MQ=255)                                         gtTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATAAGCACACCGGTACCGAACTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACAAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCg                                                                                                               >  7:115688/1‑147 (MQ=255)                                           ttGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCGACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTGCTGGGTCGACTGGGCACCAGGCTGGCGGTGGATCTGGTAGAG‑CAGGTCTGCGAATTCGgcgc                                                                                                           >  8:108921/1‑149 (MQ=255)                                           ttGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGgcgc                                                                                                           >  3:349236/1‑149 (MQ=255)                                            tGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGgcgc                                                                                                           <  2:388012/148‑1 (MQ=255)                                                      cGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCtt                                                                                                 >  4:391756/1‑148 (MQ=255)                                                       ggCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAg                                                                                                                            <  6:366584/120‑1 (MQ=255)                                                          aaCGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGc                                                                                            >  3:299193/1‑149 (MQ=255)                                                           tcaagcgccagcctggtgcccagtcgacccaggacagcgagctgccctcgggcctgcaggtcggtaccggtgtgcgtatcgtgggcaccAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGcc                                                                                           >  6:324101‑M2/90‑149 (MQ=255)                                                             gAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGc                                                                                                                      <  3:373541/120‑1 (MQ=255)                                                             gAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGc                                                                                                                      >  4:373541/1‑120 (MQ=255)                                                               aGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCggtg                                                                                       <  8:154300/149‑1 (MQ=255)                                                                 cTTTTCTGGGTGCCCACGATACGCACACCGGTACCGCCCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCggtggt                                                                                     >  3:308746/1‑149 (MQ=255)                                                                 cTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCggtggt                                                                                     <  6:32899/149‑1 (MQ=255)                                                                    ttCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTc                                                                                    <  8:224154/147‑1 (MQ=255)                                                                     tCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCga                                                                                  <  7:87995/148‑1 (MQ=255)                                                                      cctggtgcccagtcgacccaggacagcgagctgccctcgggcctgcaggtcggtaccggtgtgcgtatcgtgggcaccAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCgaga                                                                                >  1:44903‑M2/79‑149 (MQ=255)                                                                       tGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGAc                                                                               >  4:234175/1‑149 (MQ=255)                                                                         GGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGTCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCgag                                                                                 >  1:283956‑M1/1‑146 (MQ=255)                                                                          GTGCCCACGATACGCACACGGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGAGCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCAGGTGGTCGAGACGtt                                                                            >  4:108228‑M1/1‑149 (MQ=255)                                                                           TGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTg                                                                           >  3:234175‑M1/1‑149 (MQ=255)                                                                               CACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGc                                                                         <  7:241771‑M1/147‑1 (MQ=255)                                                                               CACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCa                                                                       >  1:341872‑M1/1‑149 (MQ=255)                                                                                 cGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAgg                                                                     >  7:99431/1‑149 (MQ=255)                                                                                       gCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGttgttg                                                               <  3:391756/149‑1 (MQ=255)                                                                                       gCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGttgttg                                                               >  1:305888/1‑149 (MQ=255)                                                                                       gCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGttgttg                                                               >  5:344284/1‑149 (MQ=255)                                                                                        cacaCCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑Ca                                                                                                                             >  4:5936/1‑86 (MQ=255)                                                                                        cacaCCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑Ca                                                                                                                             <  3:5936/86‑1 (MQ=255)                                                                                          ggacagcgagctgccctcgggcctgcaggtcggtaccggtgtgcgtatcgtgggcaccAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGaa                                                            <  5:324101‑M2/91‑1 (MQ=255)                                                                                                   cGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGt                                                    >  8:365441/1‑148 (MQ=255)                                                                                                    gACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGt                                                    >  4:330427/1‑147 (MQ=255)                                                                                                     aCCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAg                                                 >  8:69027/1‑149 (MQ=255)                                                                                                          cAGGCGCGTGGGCAGGTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGTTAGAG‑CAGGTCTGCGAATTCGGCGCGATCTCGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTgg                                            <  8:115688/149‑1 (MQ=255)                                                                                                          cAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTgg                                            <  3:330427/149‑1 (MQ=255)                                                                                                           aGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCTCCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGgt                                           <  8:99431/149‑1 (MQ=255)                                                                                                               ccGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTGGAG‑CAGGTCTGCGAATTCGTCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTca                                       >  4:244188/1‑148 (MQ=255)                                                                                                               ccGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTTGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTcc                                       >  2:82276/1‑149 (MQ=255)                                                                                                               ccGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTcc                                       >  1:378582/1‑149 (MQ=255)                                                                                                                    ggCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGc                                  >  4:190698/1‑149 (MQ=255)                                                                                                                         cTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACa                             <  7:19876/149‑1 (MQ=255)                                                                                                                         cTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACa                             <  7:244217/149‑1 (MQ=255)                                                                                                                         cTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGAGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGAGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGAGTCCTGAGCGGa                               >  6:391921/1‑147 (MQ=255)                                                                                                                            gCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGc                          <  1:129453/149‑1 (MQ=255)                                                                                                                                  cTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGAGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGttt                    >  8:114276/1‑149 (MQ=255)                                                                                                                                   tGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGttt                    >  2:191471/1‑148 (MQ=255)                                                                                                                                    gggTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGttt                    >  1:25479/1‑147 (MQ=255)                                                                                                                                      gTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTa                  >  7:347890/1‑147 (MQ=255)                                                                                                                                      gTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTa                  <  8:347890/147‑1 (MQ=255)                                                                                                                                      gTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGc                <  4:14856/149‑1 (MQ=255)                                                                                                                                       tCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGc                >  1:161207/1‑148 (MQ=255)                                                                                                                                            tgggcaccAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGCGAccc           >  7:29805‑M2/9‑148 (MQ=255)                                                                                                                                              ggcaccAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGCGACCCa          >  4:220415‑M2/7‑147 (MQ=255)                                                                                                                                                caccAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGCGACCCAAaga      <  4:299193‑M2/145‑1 (MQ=255)                                                                                                                                                 accAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGCGACCCAAagag     >  2:97999‑M2/4‑149 (MQ=255)                                                                                                                                                   cAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGCGACCCAAAGAGcc   >  5:140631‑M2/2‑149 (MQ=255)                                                                                                                                                   cAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGCGACCCAAAGAGcc   >  7:342411‑M2/2‑149 (MQ=255)                                                                                                                                                    aGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGCGACCCAAAGAGCCg  <  6:344284/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      ACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAG‑CAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGACGTTGGCCAGGTTGTTGGAAATGACCGTCAGGTTGGTGTCCTGAGCGGACAGGCCGGTTTTAGCGACCCAAAGAGCCG  >  NC_002947/4979119‑4979414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.