New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6019248 =	64 (1.010)	3 (0.060)	3/220	NT	5.6%	intergenic (‑49/+96)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	6019324 =	48 (0.910)					intergenic (‑125/+20)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase

GGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATCAGGTCGGCCAGCAGGC  >  NC_002947/6019181‑6019471                                                                                                                                                    |                                                                                                                                                      gggCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATgg                                                                                                                                                  <  5:141437/149‑1 (MQ=255)  ggCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCAACCACAGGTGGTGG‑ACAGCGTTGAAAAGCGGTGGTGTTGCTGTGGGGGCGGGC‑AA‑GCCCGCAAATggg                                                                                                                                                 >  5:50213/1‑149 (MQ=255)   gcgcGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGc                                                                                                                                                >  1:154005/1‑149 (MQ=255)         gcgggACGCATAGCGGCTGCCTTATGGTGGTGCGGGTTGAAAGCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCCTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGc‑ac                                                                                                                                         <  5:320477/149‑1 (MQ=255)           gggACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAg                                                                                                                                       >  1:203709/1‑149 (MQ=255)            ggACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTGCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAgg                                                                                                                                      >  1:383106/1‑149 (MQ=255)             gACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGc                                                                                                                                     >  5:72075/1‑149 (MQ=255)                  aTAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTa                                                                                                                                <  3:371450/149‑1 (MQ=255)                  aTAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAACGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTa                                                                                                                                <  5:364024/149‑1 (MQ=255)                   ttggggttGCTTTTTGTTGTTTGGGGTTTAATTGGGTG‑GTGTATTATTCGGGGGTTTGCCCGTTCCAAATGGTGGTCA‑AAAGGTTTAAAATGGGGTGGTGTTCGTGGGGTTGGGGGA‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTa                                                                                                                                <  8:41288/141‑1 (MQ=255)                   tAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCt                                                                                                                                    >  5:134520/1‑144 (MQ=255)                   tAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCt                                                                                                                                    <  6:134520/144‑1 (MQ=255)                   tAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTAc                                                                                                                               >  5:360994/1‑149 (MQ=255)                      cGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑AGAGGCTGTTActgc                                                                                                                            >  8:159517/1‑149 (MQ=255)                      cGGCTGCCTTATGGTGGTTCGGCTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTActgc                                                                                                                            <  5:348338/149‑1 (MQ=255)                        gCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTActgctg                                                                                                                          <  8:218677/149‑1 (MQ=255)                            ccTTTTGGGGGTTGGGGTTGAAATGGGGG‑GGGTATTATTCGCGGGCTTGCCCGCCCCCACTGGTCGTGC‑ACCGCTTTCAAACGGGGTGGTGTTCCTGTGGTAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGa                                                                                                                     <  2:339804/149‑1 (MQ=255)                            ccTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGa                                                                                                                     <  6:72075/149‑1 (MQ=255)                             cTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAg                                                                                                                    >  7:216673/1‑149 (MQ=255)                                    tggtTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGgcgc                                                                                                             <  5:84231/149‑1 (MQ=255)                                     ggtTGGGGTTTAAATGGGTGTGTGTTTTTTTCGCGGCCTGCCCGGCACCCCCCGG‑CGTGCAACTGATTAAAAACGGGGTGGT‑TTCCTGTGGGTTGGGGCAAA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGgcgc                                                                                                             <  6:50213/149‑1 (MQ=255)                                      gtTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTTCCCCCGACCACAGGGCGTGG‑CCAGCGTTGAAAAGCGGGGGTGTTTCGGTTGGGGCGGGC‑AACCCCCGAAAATGGGCGGGC‑‑CAGGGGGTTAAAGCTGG‑TGGGCCGgcgcgc                                                                                                           >  6:66086/1‑149 (MQ=255)                                       ttCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCt                                                                                                          <  6:360994/149‑1 (MQ=255)                                       ttCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGGCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCt                                                                                                          <  5:13745/149‑1 (MQ=255)                                       ttCGGGGTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCt                                                                                                          <  1:248469/149‑1 (MQ=255)                                          gggTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGCGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCttt                                                                                                        <  8:118619/148‑1 (MQ=255)                                                             gATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCGTTCAAAAGCGGTGGTGTTGCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTTCTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACtta                                                                                     >  3:202872/1‑148 (MQ=255)                                                               ttattCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑CCAGCTTTGAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGCGCCGGCGCGCTTTGCACGGGCTTGGCCACTTccc                                                                                   >  7:340323/1‑149 (MQ=38)                                                               ttattCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTccc                                                                                   >  7:360148/1‑149 (MQ=255)                                                                   tCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCgg                                                                                 <  3:332036/147‑1 (MQ=255)                                                                   tCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTACCgg                                                                                 >  4:332036/1‑147 (MQ=255)                                                                       GGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGACGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTg                                                                           <  1:317637‑M1/149‑1 (MQ=255)                                                                         GCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGc                                                                          <  6:401298‑M1/148‑1 (MQ=255)                                                                              CCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAAc                                                                    >  7:351120‑M1/1‑149 (MQ=255)                                                                                 GCTCCCACAGGGCGTGC‑ACAGCTTTCAAATGGGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACggg                                                                 >  2:203709‑M1/1‑149 (MQ=255)                                                                                  CTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACgg                                                                  <  1:16562‑M1/147‑1 (MQ=255)                                                                                   TCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAAc                                                                    >  1:137961‑M1/1‑144 (MQ=255)                                                                                   TCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAAc                                                                    <  2:137961‑M1/144‑1 (MQ=255)                                                                                    gctcccacaggaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACgg                                                                  >  2:45283‑M2/65‑148 (MQ=255)                                                                                     CCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGgaga                                                              <  7:115023‑M1/148‑1 (MQ=255)                                                                                      CACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCAAAAGCGCTTTTCCCGTGCTTGGCCACATCCCCGCTATTGCCATAACGGGAGat                                                             <  1:126784‑M1/148‑1 (MQ=255)                                                                                       ACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGatat                                                           <  5:162337‑M1/149‑1 (MQ=255)                                                                                       ACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGatat                                                           <  6:53174‑M1/149‑1 (MQ=255)                                                                                        ccacaggaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGgaga                                                              >  1:262814‑M2/61‑148 (MQ=255)                                                                                         cacaggaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGata                                                            >  4:101971‑M2/60‑149 (MQ=255)                                                                                            tCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATACAgg                                                      >  3:317879/1‑149 (MQ=255)                                                                                                gC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGGTTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGc                                                                          <  1:85720/126‑1 (MQ=255)                                                                                                gC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGc                                                                          >  2:85720/1‑125 (MQ=255)                                                                                                gC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATc                                                          <  3:86145/141‑1 (MQ=255)                                                                                                gC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATc                                                          >  4:86145/1‑141 (MQ=255)                                                                                                 c‑acaGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTc                                                 >  8:353396/1‑149 (MQ=255)                                                                                                 c‑acaGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTc                                                 >  8:313005/1‑149 (MQ=255)                                                                                                    caGCTTTCACACGCGGTGGTGGTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCgg                                               <  6:311738/149‑1 (MQ=255)                                                                                                       cTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCAc                                            <  8:360148/149‑1 (MQ=255)                                                                                                        tttCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGCAAAAGGATTTTAAGCATGT‑TGAGCCGGCGCGATTTCCCCGTGATTGCCCACTACCCGCATATGGCAATAACGGGAGTTAACAAGCCATACGGCaa                                            >  1:300466/1‑148 (MQ=255)                                                                                                        tttCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGCCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGCGAGATATCCAGGCCTTCGGCACt                                           >  5:13292/1‑149 (MQ=255)                                                                                                            aaaaGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGAt                                        <  1:72137/148‑1 (MQ=255)                                                                                                            aaaaGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATc                                       >  2:171347/1‑149 (MQ=255)                                                                                                                   gtggtgTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGct                                <  7:13370/149‑1 (MQ=255)                                                                                                                    tggtgTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCg                                                <  2:149183/132‑1 (MQ=255)                                                                                                                    tggtgTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCg                                                >  1:149183/1‑132 (MQ=255)                                                                                                                     ggtgTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGcttc                              >  4:380536/1‑149 (MQ=255)                                                                                                                        gtTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTg                           <  8:115023/149‑1 (MQ=255)                                                                                                                        gtTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTAG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTg                           >  1:103011/1‑149 (MQ=255)                                                                                                                         ttCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTgc                          >  7:149245/1‑149 (MQ=255)                                                                                                                               tgtgggagcgggcaagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTgcgcg                       >  6:380340‑M2/22‑148 (MQ=255)                                                                                                                                 tgggagcgggcaagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCaa                    >  7:349789‑M2/20‑149 (MQ=255)                                                                                                                                 ggggagcgggcaagcccgcAAATGGTCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTgcgcgc                      <  2:317637‑M2/128‑1 (MQ=255)                                                                                                                                  gggagcgggcaagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAAt                   >  5:119195‑M2/19‑149 (MQ=255)                                                                                                                                   ggagggtgcaagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATc                  <  8:158713‑M2/132‑1 (MQ=255)                                                                                                                                        gggcaagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATCAGGTc             <  6:162337‑M2/137‑1 (MQ=255)                                                                                                                                         ggcaagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATCAGGTCg            >  3:348994‑M2/12‑149 (MQ=255)                                                                                                                                           caagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATCAGGTCGGc          <  2:383106‑M2/140‑1 (MQ=255)                                                                                                                                            aagcccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGC‑TGAGCCGGCGCGCATTGCCCCTCCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTACTTGCGCGCAATCAGGTCGGc          >  3:291673‑M2/9‑148 (MQ=255)                                                                                                                                               cccgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATCAGGTcggccgcc      >  5:338940‑M2/6‑146 (MQ=255)                                                                                                                                                 cgcAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATCAGgtcggccgcctg    <  6:338940‑M2/146‑6 (MQ=255)                                                                                                                                                   cAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATCAGGTCGGCCAGCAGGc  <  7:159517‑M2/148‑1 (MQ=255)                                                                                                                                                   cAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATCAGGTCGGCCAGCAGGc  <  5:66086‑M2/148‑1 (MQ=255)                                                                                                                                                    aaaTGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGGGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGTCTTCGGCACTGATCTGCGGcttctt                            <  7:13613/122‑1 (MQ=255)                                                                                                                                                    aaaTGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGGGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGTCTTCGGCACTGATCTGCGGcttctt                            >  8:13613/1‑122 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTG‑GTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGC‑ACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGC‑AA‑GCCCGCAAATGGGCCGGC‑ACAGGCTGTTACTGCTGG‑TGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGCGCGCAATCAGGTCGGCCAGCAGGC  >  NC_002947/6019181‑6019471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.