New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 21956 | 37 (0.880) | 3 (0.080) | 3/244 | NT | 7.9% | coding (1759/1917 nt) | PP_0016 | hypothetical protein |
? | NC_002947 | = 21972 | 35 (0.880) | coding (1775/1917 nt) | PP_0016 | hypothetical protein |
GTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/21840‑21956 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaacgTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATCTGTCGA < NC_002947/21972‑21825 GTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGG < 1:71809/149‑1 GAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGTACTGCCGGCAAGCCGCGTTTGGAA > 7:60944/1‑102 GAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGTACTGCCGGCAAGCCGCGTTTGGAA < 8:60944/102‑1 CCAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCGAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAA > 7:115595/1‑147 CCAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCGAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAA < 8:115595/147‑1 CCAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATC > 7:55714/1‑149 CAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATCT > 7:82796/1‑149 GTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATCTGTCGA < 4:119531/149‑1 GTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/21840‑21956 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaacgTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATCTGTCGA < NC_002947/21972‑21825 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |