New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 2195637 (0.880)3 (0.080) 3/244 NT 7.9% coding (1759/1917 nt) PP_0016 hypothetical protein
?NC_002947 = 21972 35 (0.880)coding (1775/1917 nt) PP_0016 hypothetical protein

GTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/21840‑21956
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaacgTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATCTGTCGA  <  NC_002947/21972‑21825
                                                                                                                                                                                                                                                                         
GTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGG                                                                                                                      <  1:71809/149‑1
                                        GAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGTACTGCCGGCAAGCCGCGTTTGGAA                                                                                                                             >  7:60944/1‑102
                                        GAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGTACTGCCGGCAAGCCGCGTTTGGAA                                                                                                                             <  8:60944/102‑1
                                                                                                              CCAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCGAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAA          >  7:115595/1‑147
                                                                                                              CCAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCGAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAA          <  8:115595/147‑1
                                                                                                              CCAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATC        >  7:55714/1‑149
                                                                                                               CAAACGTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATCT       >  7:82796/1‑149
                                                                                                                    GTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATCTGTCGA  <  4:119531/149‑1
                                                                                                                                                                                                                                                                         
GTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/21840‑21956
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaacgTACTGCCGGCAAGCCGCGTTTGGAATGGATGGCCCCGCAACGGGGCGAAACCTGGCCTCCCAAAGGTGCTTGAACGCCTCCCTGGTCGACTTCCCCAAATACACCGCAATCTCCGGTCCCAAGATATAGCCACGCCTGAATCTGTCGA  <  NC_002947/21972‑21825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.