New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 21956	37 (0.880)	3 (0.080)	3/244	NT	7.9%	coding (1759/1917 nt)	PP_0016	hypothetical protein
	?	NC_002947	= 21972	35 (0.880)					coding (1775/1917 nt)	PP_0016	hypothetical protein

TCGACAGATTCAGGCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCAAGATAG  >  NC_002947/21825‑22114                                                                                                                                                    |                                                                                                                                               tCGACAGATTCAGGCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTAc                                                                                                                                               <  4:119531‑M2/149‑2 (MQ=255)      aGATTCAGGCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTAcgtttg                                                                                                                                          >  7:82796‑M2/1‑143 (MQ=255)       gATTCAGGCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTAcgtttgg                                                                                                                                         >  7:55714‑M2/1‑142 (MQ=255)         ttCAGGCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTCGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTAcgtttgg                                                                                                                                         >  7:115595‑M2/1‑140 (MQ=255)         ttCAGGCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTCGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTAcgtttgg                                                                                                                                         <  8:115595‑M2/147‑8 (MQ=255)            aGGCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTaag                                                                                                                                    <  2:144460/149‑1 (MQ=255)            aGGCGTGGCTATATCTTGGGACCGGAGATTACGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTaag                                                                                                                                    <  3:78187/149‑1 (MQ=255)              gCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTaag                                                                                                                                    >  3:3702/1‑147 (MQ=255)               cGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTaagaag                                                                                                                                 <  6:254397/149‑1 (MQ=255)                   gCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCaaa                                                                                                                             <  8:231232/149‑1 (MQ=255)                     tataTCTTGGGACCGGTGATTGCTGTGTATTTGGGGAAGTCGACCATGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCaa                                                                                                                              <  8:140902/146‑1 (MQ=255)                     tataTCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCGGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCaa                                                                                                                              >  7:140902/1‑146 (MQ=255)                               gACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCt                                                                                                                        <  2:47605/142‑1 (MQ=255)                               gACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCt                                                                                                                        >  1:47605/1‑142 (MQ=255)                               gACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGAt                                                                                                                 >  8:156958/1‑149 (MQ=255)                                aCCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGAtt                                                                                                                <  3:10014/149‑1 (MQ=255)                                 ccGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTa                                                                                                               <  3:119531/149‑1 (MQ=255)                                  cGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGa                                                                                                                      <  2:54130/141‑1 (MQ=255)                                  cGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGa                                                                                                                      >  1:54130/1‑141 (MQ=255)                                   ggAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTAcc                                                                                                             >  1:203871/1‑149 (MQ=255)                                            ggTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTg                                                                                                    <  7:156958/149‑1 (MQ=255)                                                             cGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATcgac                                                                                   >  4:230736/1‑149 (MQ=255)                                                              gACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATcgac                                                                                   >  7:226334/1‑148 (MQ=255)                                                                    ggAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTg                                                                            <  8:226334/149‑1 (MQ=255)                                                                               aGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACg                                                                 >  8:178117/1‑149 (MQ=255)                                                                                           aGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCcaca                                                     <  4:3702/149‑1 (MQ=255)                                                                                             gCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACAcc                                                   >  7:250784/1‑149 (MQ=255)                                                                                              ccAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCacac                                                    >  1:194713/1‑147 (MQ=255)                                                                                              ccAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCacac                                                    <  2:194713/147‑1 (MQ=255)                                                                                                aGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGttt                                                              <  7:64214/135‑1 (MQ=255)                                                                                                aGGTTTCGCCCCGTTGCGGGGCCATCCATTCAAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGttt                                                              >  8:64214/1‑135 (MQ=255)                                                                                                  gTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGATGCAAAAAGCTGATCGATTCCCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCg                                              >  7:7398/1‑149 (MQ=255)                                                                                                     tCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCt                                            <  3:230736/148‑1 (MQ=255)                                                                                                                     ccatccatTCCAAACGCGGCTTGCCGGCAGTAcgtttggaatggatggccccgcaacggggcgaaacctggcctcccaaaggtgcttgaacgcctccctggtcgacttccccaaatacaccgcaatctccggtcccaagatatagccac                           <  1:71809‑M2/149‑118 (MQ=255)                                                                                                                          catTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGATTc                       <  2:203871/148‑1 (MQ=255)                                                                                                                            ttCCAAACGCGGCTTGCCGGCAGTAcgtttggaatggatggccccgcaacggggcgaaacctggcctcccaaaggtgcttgaacgcctccctggtcgacttc                                                                   >  7:60944‑M2/1‑25 (MQ=255)                                                                                                                            ttCCAAACGCGGCTTGCCGGCAGTAcgtttggaatggatggccccgcaacggggcgaaacctggcctcccaaaggtgcttgaacgcctccctggtcgacttc                                                                   <  8:60944‑M2/102‑78 (MQ=255)                                                                                                                              ccAAACGCGGCTTGCCGGCAGTACGTGTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGc                   <  8:250784/148‑1 (MQ=255)                                                                                                                               cAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGa                          <  7:57238/140‑1 (MQ=255)                                                                                                                               cAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGa                          >  8:57238/1‑140 (MQ=255)                                                                                                                                 aaCGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCAtgt               >  4:249038/1‑149 (MQ=255)                                                                                                                                      ggCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGAt          >  7:9388/1‑149 (MQ=255)                                                                                                                                         ttGCCGGGAGTACGTTTGGGTAAGAAGCATAAAGCTGATCGATTACCTCGCAATTGAAGCCGCCGAGATCGAGGATCCTGAAGCCATCACGTTTTTATCCACACCGTTGGGTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCaa       <  5:67695/149‑1 (MQ=255)                                                                                                                                            cgggCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTAGCTCGCAAGTGAAGCCGCCCAGATCGCCGATCCTGAAGCCATCACGTTTTTATGCACACCGATCGCTCAGCCTCGTGAGTGCCGCTTCAGGCATCTGGGATCTAGa     >  4:36033/3‑148 (MQ=255)                                                                                                                                             cGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCAAGATa   <  8:9388/149‑1 (MQ=255)                                                                                                                                              ggCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCAAGATAg  >  7:91354/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                               TCGACAGATTCAGGCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCAAGATAG  >  NC_002947/21825‑22114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.