New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 62692	34 (0.810)	3 (0.080)	3/242	NT	7.6%	coding (937/1269 nt)	PP_0053	sulfide:quinone oxidoreductase
	?	NC_002947	= 62746	41 (1.040)					coding (991/1269 nt)	PP_0053	sulfide:quinone oxidoreductase

ACATGCTGCACGTGGTACCGCCACAGGTGGCGCCAGACTTCATTCGCGAAAGCCCCTTGGCGGATAGCTCCGGCTGGGTTGACGTCGATCCGCATACCCTGCGCCATCGCAAATACACCAACGTTCATGCCCTAGGTGACGTGGCTAACACCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/62537‑62692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagcaCATTGTTGGCGACCACCGGTGCCTGCTTGCGCGCCGCAGCGGCGGTCTTGGCATTGCTGGTGTTAGCCACGTCACCTAGGGCATGAACGTTGGTGTATTTGCGATGGCGCAGGGTATGCGGATCGACGTCAACCCAGCCG  <  NC_002947/62746‑62607                                                                                                                                                                                                                                                                                                          ACATGCTGCACGTGGTACCGCCACAGGTGGCGCCAGACTTCATTCGCGAAAGCCCCTTGGCGGATAGCTCCGGCTGGGTTGACGTCGATCCGCATACCCTGCGCCATCGCAAATACACCAACGTTCATGCCCTAGGTGACGTGGCTAAC                                                                                                                                                     <  5:4186/149‑1      CTGCACGTGGTACCGCCACAGGTGGCGCCAGACTTCATTCGCGAAAGCCCCTTGGCGGATAGCTCCGGCTGGGTTGACGTCGATCCGCATACCCTGCGCCATCGCAAATACACCAACGTTCATGCCCTAGGTGACGTGGCTAACACCAG                                                                                                                                                >  2:200330/1‑149      CTGCACGTGGTACCGCCACAGGTGGCGCCAGACTTCATTCGCGAAAGCCCCTTGGCGGATAGCTCCGGCTGGGTTGACGTCGATCCGCATACCCTGCGCCATCGCAAATACACCAACGTTCATGCCCTAGGTGACGTGGCTAACACCA                                                                                                                                                 <  6:101734/148‑1                                         CATTCGCGAAAGCCCCTTGGCGGATAGCTCCGGCTGGGTTGACGTCGATCCGCATACCCTGCGCCATCGCAAATACACCAACGTTCATGCCCTAGGTGACGTGGCTAACACCAGCACATTGTTGGCGACCACCGGTGCCTGCTTGCGCG                                                                                                             >  3:28338/1‑149                                                                         GCTGGGTTGACGTCGATCCGCATACCCTGCGCCATCGCAAATACACCAACGTTCATGCCCTAGGGGACGTGGCTAACACCAGCACATTGTTGGCGACCACCGGTGCCTGCTTGCGCGCCGCAGCGGCGGTCTTGGCATTGCTGGTGTTA                                                                             <  5:42610/149‑1                                                                              GTTGACGTCGATCCGCATACCCTGCGCCATCGCAAATACACCAACGTTCATGCCCTAGGTGACGTGGCTAACACCAGCACATTGTTGGCGACCACCGGTGCCTGCTTGCGCGCCGCAGCGGCGGTCTTGGCATTGCTGGTGTTAGCCAC                                                                        <  4:28338/149‑1                                                                                                                                                     CACCAGCACATTGTTGGCGACCACCGGTGCCTGCTTGCGCGCCGCAGCGGCGGTCTTGGCATTGCTGGTGTTAGCCACGTCACCTAGGGCATGAACGTTGGTGTATTTGCGATGGCGCAGGGTATGCGGATC                  <  7:150768/132‑1                                                                                                                                                     CACCAGCACATTGTTGGCGACCACCGGTGCCTGCTTGCGCGCCGCAGCGGCGGTCTTGGCATTGCTGGTGTTAGCCACGTCACCTAGGGCATGAACGTTGGTGTATTTGCGATGGCGCAGGGTATGCGGATC                  >  8:150768/1‑132                                                                                                                                                      ACCAGCACATTGTTGGCGACCACCGGTGCCTGCTTGCGCGCCGCAGCGGCGGTCTTGGCATTGCTGGTGTTAGCCACGTCACCTAGGGCATGAACGTTGGTGTATTTGCGATGGCGCAGGGTATGCGGATCGACGTCAACCCAGCCG  >  6:239845/1‑147                                                                                                                                                                                                                                                                                                          ACATGCTGCACGTGGTACCGCCACAGGTGGCGCCAGACTTCATTCGCGAAAGCCCCTTGGCGGATAGCTCCGGCTGGGTTGACGTCGATCCGCATACCCTGCGCCATCGCAAATACACCAACGTTCATGCCCTAGGTGACGTGGCTAACACCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/62537‑62692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagcaCATTGTTGGCGACCACCGGTGCCTGCTTGCGCGCCGCAGCGGCGGTCTTGGCATTGCTGGTGTTAGCCACGTCACCTAGGGCATGAACGTTGGTGTATTTGCGATGGCGCAGGGTATGCGGATCGACGTCAACCCAGCCG  <  NC_002947/62746‑62607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.