| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 337297 = | 45 (1.070) | 3 (0.070) | 3/252 | NT | 6.1% | coding (454/1206 nt) | PP_0279 | hypothetical protein |
| ? | NC_002947 | 337369 = | 48 (1.160) | coding (382/1206 nt) | PP_0279 | hypothetical protein | |||||
CACTGGCTGGACTGGTGTTCTGGCAAAGGCCACCTGGGCCGCCGCCTGCTGCAACCCGGCCAACACCTGACCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/337372‑337297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGTGGCGGGGCTGCTCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGAC > NC_002947/337369‑337441 CACTGGCTGGACTGGTGTTCTGGCAAAGGCCACCTGGGCCGCCGCCTGCTGCAACCCGGCCAACACCTGACCTGCCAGTGGCGGGGCTGCTCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGAC > 3:31368/1‑149 GCTGGACTGGTGTTCTGGCAAAGGCCACCTGGGCCGCCGCCTGCTGCAACCCGGCCAACACCTGACCTGCCAGTGGCGGGGCTGCTCGCGGAAG < 5:171918/94‑1 GCTGGACTGGTGTTCTGGCAAAGGCCACCTGGGCCGCCGCCTGCTGCAACCCGGCCAACACCTGACCTGCCAGTGGCGGGGCTGCTCGCGGAAG > 6:171918/1‑94 CACTGGCTGGACTGGTGTTCTGGCAAAGGCCACCTGGGCCGCCGCCTGCTGCAACCCGGCCAACACCTGACCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/337372‑337297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGTGGCGGGGCTGCTCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGAC > NC_002947/337369‑337441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |