New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	337297 =	45 (1.070)	3 (0.070)	3/252	NT	6.1%	coding (454/1206 nt)	PP_0279	hypothetical protein
	?	NC_002947	337369 =	48 (1.160)					coding (382/1206 nt)	PP_0279	hypothetical protein

ACATGCTGCGCCGGCAAGTGGTGGTGCGTGCTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCGGGAGGTTGCCGAGTGCCGA  >  NC_002947/337224‑337504                                                                                                                                                  |                                                                                                                                          gtccccggccgcaaatggcagcagatcgaagccttcgccagccacctggccttccgcgagcagccccgccactGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTg                                                                                                                                        >  3:31368‑M1/74‑149 (MQ=255)   aTGCTGCGCCGGCAAGTGGTGGTGCGTGCTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGc                                                                                                                                      >  6:192452/1‑149 (MQ=255)    tgctgcGCCGGCAAGTGGTGGTGCGTGCTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCg                                                                                                                                     >  5:37973/1‑149 (MQ=255)         cgcCGGCAAGTGGTGGTGCGTGCTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCgggg                                                                                                                                  <  5:192452/147‑1 (MQ=255)         cgcCGGCAAGTGGTGGTGCGTGCTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCgggg                                                                                                                                  <  6:139711/147‑1 (MQ=255)              gCAAGTGGTGGTGCGTGCTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑Tcg                                                                                                                         >  8:201058/1‑149 (MQ=255)               cAAGTGGTGGTGCGTGCTCAGGACCTGGCCTGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑Tcgc                                                                                                                        <  8:175641/149‑1 (MQ=255)               cAAGTGGTGGTGCGTGCTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑Tcgc                                                                                                                        <  8:111597/149‑1 (MQ=255)                   tggtggtgCGTGCTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGaa                                                                                                                    <  3:85249/149‑1 (MQ=255)                             tgcTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGtgg                                                                                                          >  6:203359/1‑149 (MQ=255)                                tCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGtggctg                                                                                                       >  2:69944/1‑149 (MQ=255)                                  aGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCGAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGtggctgg                                                                                                      <  8:175899/148‑1 (MQ=255)                                  aGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGtggctggc                                                                                                     >  4:201304/1‑149 (MQ=255)                                  aGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGtggctgg                                                                                                      >  7:175899/1‑148 (MQ=255)                                      ccTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAg                                                                                                 <  5:203359/149‑1 (MQ=255)                                           ccGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTc                                                                                            <  5:263176/149‑1 (MQ=255)                                                 gcgACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATctg                                                                                      >  5:97318/1‑149 (MQ=255)                                                         ttCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCAtt                                                                              >  2:208089/1‑149 (MQ=255)                                                           cGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCAttt                                                                             <  1:69944/148‑1 (MQ=255)                                                               aTCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGc                                                                        <  3:2278/149‑1 (MQ=255)                                                               aTCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGc                                                                        >  4:2278/1‑149 (MQ=255)                                                                 cGTATTACAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCAAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCg                                                                      >  2:73879/1‑149 (MQ=255)                                                                     ttCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGa                                                                  >  2:164573/1‑149 (MQ=255)                                                                     ttCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGa                                                                  >  1:90594/1‑149 (MQ=255)                                                                      tCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGAc                                                                 >  2:138158/1‑149 (MQ=255)                                                                      cactggctggactggtgttctggcaaaggccacctgggccgccgcctgctgcaacccggccaacacctgacctgccAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGAc                                                                 >  3:31368‑M2/77‑149 (MQ=255)                                                                        caggcaggTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCggg                                                                    >  3:38898/1‑144 (MQ=255)                                                                        caggcaggTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCggg                                                                    <  4:38898/144‑1 (MQ=255)                                                                         aggcaggTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGc                                                              >  7:2830/1‑149 (MQ=255)                                                                         aggcaggTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGc                                                              >  7:6574/1‑149 (MQ=255)                                                                           gctggactggtgttctggcaaaggccacctgggccgccgcctgctgcaacccggccaacacctgacctgccAGTGGCGGGGCTGC‑‑TCGCGGAAg                                                                                                                   <  5:171918‑M2/23‑1 (MQ=255)                                                                           gctggactggtgttctggcaaaggccacctgggccgccgcctgctgcaacccggccaacacctgacctgccAGTGGCGGGGCTGC‑‑TCGCGGAAg                                                                                                                   >  6:171918‑M2/72‑94 (MQ=255)                                                                                  aggtGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAg                                                     <  3:201304/149‑1 (MQ=255)                                                                                       ttGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGa                                                 <  7:201058/148‑1 (MQ=255)                                                                                                   cagcagGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCgggg                                     <  1:208089/148‑1 (MQ=255)                                                                                                    agcagGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGCAGTCGCGGAAGGCCCGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCgggg                                     >  1:77567/1‑149 (MQ=255)                                                                                                      cagGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCgggggg                                   >  1:213180/1‑147 (MQ=255)                                                                                                         gcggcggcCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCgg                                                                     >  2:26452/1‑110 (MQ=255)                                                                                                         gcggcggcCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCgg                                                                     <  1:26452/110‑1 (MQ=255)                                                                                                                cccAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCgcggcg                                        <  7:77423/132‑1 (MQ=255)                                                                                                                cccAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCgcggcg                                        >  8:77423/1‑132 (MQ=255)                                                                                                                 ccAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTcc                      >  7:7977/1‑149 (MQ=255)                                                                                                                   aGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCgg                    <  6:97318/149‑1 (MQ=255)                                                                                                                             tGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCGGGAGGTTGcc           <  6:37973/148‑1 (MQ=255)                                                                                                                              gCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCGGGAGGTTGcc           >  3:183816/1‑147 (MQ=255)                                                                                                                                cAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCgggg                                     >  7:136505/1‑119 (MQ=255)                                                                                                                                cAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCgggg                                     <  8:136505/119‑1 (MQ=255)                                                                                                                                cAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCGGGAGGTTGCCGAGt       <  4:183816/149‑1 (MQ=255)                                                                                                                                cAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCGGGAGGTTGCCGAGt       >  2:38176/1‑149 (MQ=255)                                                                                                                                      acCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCgg                    <  6:242040/130‑1 (MQ=255)                                                                                                                                      acCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCgg                    >  5:242040/1‑130 (MQ=255)                                                                                                                                      acCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCGGGAGGTTGCCGAGTGCCGa  >  5:59140/1‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                          ACATGCTGCGCCGGCAAGTGGTGGTGCGTGCTCAGGACCTGGCCGGCGGCGACCAGTTCGGCATCGTATTCCAGGCAGGTCAGGTGTTGGCCGGGTTGCAGCAGGCGGCGGCCCAGGTGGCCTTTGCCAGAACACCAGTCCAGCCAGTGGCGGGGCTGC‑‑TCGCGGAAGGCCAGGTGGCTGGCGAAGGCTTCGATCTGCTGCCATTTGCGGCCGGGGACGGCTACGTCGAGGCGATGCGCGGCGGGGGGCAGGTCGGTTTCCGGGAGGTTGCCGAGTGCCGA  >  NC_002947/337224‑337504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.