New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 426730 | 44 (1.040) | 4 (0.100) | 4/246 | NT | 8.8% | coding (1069/2433 nt) | PP_0350 | ferrichrome‑iron receptor |
? | NC_002947 | = 426754 | 41 (1.020) | coding (1045/2433 nt) | PP_0350 | ferrichrome‑iron receptor |
GCGCAGGTTCTGGCGGAACTGCCAGACGTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/426578‑426730 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccACCAGCCAGTTCCGGCCCATCCAGGGCACCAAGATCGACATGCCGTTCGGCAAGATCTCGCACCACAAGAACCTGGGTGACCCGGATTACGAGTTCTACGACCGCACTTACTACGCGCTGGGTTACGCCTTCGAACACCGCAT < NC_002947/426754‑426612 GCGCAGGTTCTGGCGGAACTGCCAGACGTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGG > 5:214291/1‑149 GCGCAGGTTCTGGCGGAACTGCCAGACGTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTG < 2:122830/148‑1 GCGCAGGTTCTGGCGGAACTGCCAGACGTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTG < 7:35853/148‑1 CGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCACCAGCCAGTTCCGGCCCATCCAGGGCACCAA < 6:178052/148‑1 GGTGTTCGAATGCGTATCCCAGCGCGTAGTATGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCACAAGCGAGTTCCGGCCCATCCAGGGCACCAAGA < 4:79364/149‑1 cgGCGCGTAGTAAGTGCGGGCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGgg < 4:18930/92‑3 GTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCACCAGCCAGTTCCGGCCCATCCAGGGCACCAAGAT < 3:153836/122‑1 GTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCACCAGCCAGTTCCGGCCCATCCAGGGCACCAAGAT > 4:153836/1‑122 GTGCCACCAGCCAGTTCCGGCCCATCCAGGGCACCAAGATCGACATGCCGTTCGGCAAGATCTCGCACCACAAGAACCTGGGTGACCCGGATTACGAGTTCTACGACCGCACTTACTACGCGCTGGGTTACGCCTTCGAACACCGCAT > 2:70759/1‑148 GCGCAGGTTCTGGCGGAACTGCCAGACGTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/426578‑426730 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccACCAGCCAGTTCCGGCCCATCCAGGGCACCAAGATCGACATGCCGTTCGGCAAGATCTCGCACCACAAGAACCTGGGTGACCCGGATTACGAGTTCTACGACCGCACTTACTACGCGCTGGGTTACGCCTTCGAACACCGCAT < NC_002947/426754‑426612 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |