New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 426730	44 (1.040)	4 (0.100)	4/246	NT	8.8%	coding (1069/2433 nt)	PP_0350	ferrichrome‑iron receptor
	?	NC_002947	= 426754	41 (1.020)					coding (1045/2433 nt)	PP_0350	ferrichrome‑iron receptor

GCGGAACTGCCAGACGTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAATGTTGTAGCGCTTGTTGTCGATGTGGTCGATTTGGG  >  NC_002947/426590‑426873                                                                                                                                             |                                                                                                                                                gCGGAACTGCCAGACGTCATTGCTGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGAt                                                                                                                                           <  8:86214/147‑1 (MQ=255) gCGGAACTGCCAGACGTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGAt                                                                                                                                           <  2:11369/147‑1 (MQ=255)        tGCCAGACGTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGaa                                                                                                                                  >  1:130493/1‑149 (MQ=255)                gTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAActggctgg                                                                                                                          >  3:163939/1‑149 (MQ=255)                 tCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCtggt                                                                                                                         <  1:182501/149‑1 (MQ=255)                       aTGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTggcac                                                                                                                    >  2:70759‑M2/1‑143 (MQ=255)                          cGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCaccagccagttccggcccatccagggcaccaa                                                                                                                 <  6:178052‑M1/148‑33 (MQ=255)                          cGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGt                                                                                                                <  6:214291/149‑1 (MQ=255)                           ggTGTTCGAATGCGTATCCCAGCGCGTAGTATGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCacaagcgagttccggcccatccagggcaccaaga                                                                                                               <  4:79364‑M1/149‑35 (MQ=255)                                  gAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCAc                                                                                                        >  7:51080/1‑149 (MQ=255)                                  gAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCAc                                                                                                        >  5:55122/1‑149 (MQ=255)                                      gCGTCACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCCCGGGt                                                                                                    <  7:242870/149‑1 (MQ=255)                                      gCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGt                                                                                                    <  5:67796/149‑1 (MQ=255)                                                gcgcGTAGTAAGTGCGGTCGTAGAAGTCTTAATCCGGGTCACGCAGGTTCTTGTGGTGCGAGATCTTGCGGAACGGCATGTCGATCTTTGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTg                                                                                          <  6:55122/149‑1 (MQ=255)                                                 cgcgTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGa                                                                                         <  5:210477/149‑1 (MQ=255)                                                       gtaAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCaccagccagttccggcccatccagggcaccaagat                                                                                                              <  3:153836‑M1/122‑36 (MQ=255)                                                       gtaAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCaccagccagttccggcccatccagggcaccaagat                                                                                                              >  4:153836‑M1/1‑87 (MQ=255)                                                        taAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGt                                                                                  >  3:56277/1‑149 (MQ=255)                                                            tGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCt                                                                                                                                               <  3:170157/84‑1 (MQ=255)                                                            tGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCt                                                                                                                                               >  4:170157/1‑84 (MQ=255)                                                            tGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAAATGGGTGAGGAAGGTAAGc                                                                              >  8:95708/1‑149 (MQ=255)                                                             gCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGa                                                                                         <  6:230218/137‑1 (MQ=255)                                                               ggTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGcgtc                                                                           >  7:90174/1‑149 (MQ=255)                                                                 tCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGcgtcgt                                                                         <  8:51080/149‑1 (MQ=255)                                                                 tCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGcgtcgt                                                                         <  5:114201/149‑1 (MQ=255)                                                                    tAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTc                                                                      <  2:130493/149‑1 (MQ=255)                                                                     aGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGt                                                                                                                <  8:158140/106‑1 (MQ=255)                                                                     aGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGt                                                                                                                >  7:158140/1‑106 (MQ=255)                                                                          tCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGt                                                                 >  4:39332/1‑148 (MQ=255)                                                                            gTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCACTGGATGGGCCTGAACTGTCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCa                                                               >  2:266923/1‑148 (MQ=255)                                                                                tCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGt                                                           >  6:203446/1‑148 (MQ=255)                                                                                  cGGGTCACCCAGGTTCTTGTTGTGCGAGATCTTGCAGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGTTGAACTTGGTGAGGAAGGTCAGCGTCTTGTCTTCGTCAATGTTc                                                         <  1:266923/148‑1 (MQ=255)                                                                                    ggTCACCCAGGTTCTTGTTGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAg                                                      <  4:56277/149‑1 (MQ=255)                                                                                          ccAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAgg                                                >  8:32417/1‑149 (MQ=255)                                                                                           cAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGc                                               >  8:209296/1‑149 (MQ=255)                                                                                               ttCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTgg                                           <  7:32417/149‑1 (MQ=255)                                                                                                tCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGcgtc                                                                           <  2:16341/116‑1 (MQ=255)                                                                                                tCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGcgtc                                                                           >  1:16341/1‑116 (MQ=255)                                                                                                 cTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTggg                                          <  3:39332/148‑1 (MQ=255)                                                                                                    gtggtgCGAGATCTTGCCGAACGGCACGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTggg                                          <  1:102974/145‑1 (MQ=255)                                                                                                    gtggtgCGAGATCTTGCCGAACGGCACGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTggg                                          >  2:102974/1‑145 (MQ=255)                                                                                                     tggtgCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGTGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAAt                                     <  7:95708/149‑1 (MQ=255)                                                                                                     tggtgCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAAt                                     <  5:95021/149‑1 (MQ=255)                                                                                                       gtgCTAGATCTTGCCTAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGTAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAAtg                                    <  8:90619/148‑1 (MQ=255)                                                                                                           gagaTCTTGCCGAACGGCATGTCTATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAATGTTGTa                               <  4:163939/149‑1 (MQ=255)                                                                                                                     cGAACGGCATGTCGATCTTGTTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGTTATCGTCACGGGAGAACTGGGTGATTAAGGTCAGCGTCGTGTCTTCGTCAAAGTTCCAGGTCAGTGTTGGGGCAATGTTGTATCGAttagtg                     >  8:195826/1‑145 (MQ=255)                                                                                                                     cGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAATGTTGTAGCGCttgttg                     >  8:37157/1‑149 (MQ=255)                                                                                                                       aaCGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAATGTTGTAGCGCTTGTTGTc                   >  5:9759/1‑149 (MQ=255)                                                                                                                        aCGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAATGTTGTAGCGCTTGTTGTCg                  <  6:9759/149‑1 (MQ=255)                                                                                                                                  gATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATc                                                                                                             >  4:197392/1‑48 (MQ=255)                                                                                                                                  gATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAATGTTGTAGCGCTTGTTGTCGATGTGGTCGa        >  1:166496/1‑149 (MQ=255)                                                                                                                                   aTCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTggcaccaagatcgacatgccgttcggcaagatctcgcaccacaagaacctgggtgacccggattacgagttctacgaccgcacttac                                  <  3:153836‑M2/122‑88 (MQ=255)                                                                                                                                   aTCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTggcaccaagatcgacatgccgttcggcaagatctcgcaccacaagaacctgggtgacccggattacgagttctacgaccgcacttac                                  >  4:153836‑M2/1‑35 (MQ=255)                                                                                                                                    tCTTGGTGCCCTGGATGGGCCGGAACTCGCTTGTggcaccaagatcgacatgccgttcggcaagatctcgcaccacaagaacctgggtgacccggattacgagttctacgaccgcacatactacgcgctgggatacgcattcgaacacc      <  4:79364‑M2/149‑116 (MQ=255)                                                                                                                                      ttGGTGCCCTGGATGGGCCGGAACTGGCTGGTggcaccaagatcgacatgccgttcggcaagatctcgcaccacaagaacctgggtgacccggattacgagttctacgaccgcacttactacgcgctgggttacgccttcgaacaccg     <  6:178052‑M2/148‑117 (MQ=255)                                                                                                                                         gTGCCaccagccagttccggcccatccagggcaccaagatcgacatgccgttcggcaagatctcgcaccacaagaacctgggtgacccggattacgagttctacgaccgcacttactacgcgctgggttacgccttcgaacaccgcat  >  2:70759‑M1/1‑5 (MQ=255)                                                                                                                                             |                                                                                                                                                GCGGAACTGCCAGACGTCATTGATGCGGTGTTCGAAGGCGTAACCCAGCGCGTAGTAAGTGCGGTCGTAGAACTCGTAATCCGGGTCACCCAGGTTCTTGTGGTGCGAGATCTTGCCGAACGGCATGTCGATCTTGGTGCCCTGGATGGGCCGGAACTGGCTGGTGGCACCGGTATCGTCACGGGTGAACTGGGTGAGGAAGGTCAGCGTCGTGTCTTCGTCAATGTTCCAGGTCAGGCTTGGGGCAATGTTGTAGCGCTTGTTGTCGATGTGGTCGATTTGGG  >  NC_002947/426590‑426873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.