New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 446004	41 (0.970)	4 (0.100)	4/248	NT	9.0%	coding (690/1806 nt)	PP_0368	acyl‑CoA dehydrogenase
	?	NC_002947	= 446076	41 (1.010)					coding (762/1806 nt)	PP_0368	acyl‑CoA dehydrogenase

AGGCCGAGCCACAGGCCGACGGCAGCTACAAAGTGTCGGGCACCAAGATCTTCATTTCGGCCGGTGAGCACGACATGGCC‑‑‑GACAACATCGTCCATATCGTCCTGGCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/445853‑446004 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcGATCGAGCCGCAGCTCACGCCGTTGCGCTCGCCCACGCCGCCCTCGGCGTTGGGCAGGAACTTCGGCACGATGAACAGCGAAATCCCCTTGGTACCGGCCGGTGCGTCCGGCAGGCGGGCCAGGACGATATGGACGATGTTGTCGG  <  NC_002947/446076‑445931                                                                                                                                                                                                                                                                                                               AGGCCGAGCCACAGGCCGACGGCAGCTACAAAGTGTCGGGCACCAAGATCTTCATTTCGGCCGGTGAGCACGACATGGCC‑‑‑GACAACATCGTCCATATCGTCCTGGCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTG                                                                                                                                                       >  1:85771/1‑149   GCCGAGCCACAGGCCGACGGCAGCTACAAAGTGTCGGGCACCAAGATCTTCATTTCGGCCGGTGAGCACGACATGGCCCCTGACAACATCGTCCATATCGTCCTGGCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCT                                                                                                                                                        <  1:219069/149‑1    CCGAGCCACAGGCCGACGGCAGCTACAAAGTGTCGGGCACCAAGATCTTCATTTCGGCCGGTGAGCACGACATGGCC‑‑‑GACAACATCGTCCATATCGTCCTGGCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTGTTC                                                                                                                                                    <  4:119893/149‑1             AGGCCGACGGCAGCTACAAAGTGTCGGGCACCAAGATCTTCATTTCGGCCGGTGAGCACGACATGGCC‑‑‑GACAACATCGTCCATATCGTCCTGGCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTGT                                                                                                                                                      <  3:29885/138‑1             AGGCCGACGGCAGCTACAAAGTGTCGGGCACCAAGATCTTCATTTCGGCCGGTGAGCACGACATGGCC‑‑‑GACAACATCGTCCATATCGTCCTGGCCAGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTGT                                                                                                                                                      >  4:29885/1‑138                                                       TTTCGGCCGGTGAGCACGACATGGCC‑‑‑GACAACATCGTCCATATCGTCCTGGCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTGTTCGATCGAGCCGCAGCTCACGCCGTTGCGCTCGCCCACGCCGCCCTCGGCGTT                                                                                                 >  3:154170/1‑149                                                                                             GTCCATATCGTCCTGGCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTGTTCGATCGAGCCGCAGCTCACGCCGTTGCGCTCGCCCACGCCGCCCTCGGCGTTGGGCAGGAACTTCGGCACGATGAACAGCGAAATC                                                               <  4:154170/148‑1                                                                                                            GCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTGTTCGATCGAGCCGCAGCTCACGCCGTTGCGCTCGCCCACGCCGCTCTCGGCGTTGGGCAGGAACTTCGGCACGATGAACAGCGA                                                                   <  5:90785/129‑1                                                                                                            GCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTGTTCGATCGAGCCGCAGCTCACGCCGTTGCGCTCGCCCACGCCGCTCTCGGCGTTGGGCAGGAACTTCGGCACGATGAACAGCGA                                                                   >  6:90785/1‑129                                                                                                                                                         TTCGATCGAGCCGCAGCTCACGCCGTTGCGCTCGCCCACGCCGCCCTCGGCGTTGGGCAGGAACTTCGGCACGATGAACAGCGAAATCCCCTTGGTACCGGCCGGTGCGTCCGGCAGGCGGGCCAGGACGATATGGACGATGTTGTCGG  >  6:177176/1‑149                                                                                                                                                                                                                                                                                                               AGGCCGAGCCACAGGCCGACGGCAGCTACAAAGTGTCGGGCACCAAGATCTTCATTTCGGCCGGTGAGCACGACATGGCC‑‑‑GACAACATCGTCCATATCGTCCTGGCCCGCCTGCCGGACGCACCGGCCGGTACCAAGGGGATTTCGCTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/445853‑446004 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcGATCGAGCCGCAGCTCACGCCGTTGCGCTCGCCCACGCCGCCCTCGGCGTTGGGCAGGAACTTCGGCACGATGAACAGCGAAATCCCCTTGGTACCGGCCGGTGCGTCCGGCAGGCGGGCCAGGACGATATGGACGATGTTGTCGG  <  NC_002947/446076‑445931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.