New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	662685 =	48 (1.140)	3 (0.070)	3/246	NT	6.3%	coding (270/1338 nt)	PP_0569	MATE efflux family protein
	?	NC_002947	662722 =	44 (1.090)					coding (233/1338 nt)	PP_0569	MATE efflux family protein

GTCATCGGTCATCTCCCGCACGCCCACCAACTGGGCGCCGTGGCCGTGGGCGCCACCTTGTTCACCTTCATGGTCGGCCTGATGGGCTTCCTGCGCATGGGGTCCACCGGCTTCGCTGCCCAGGCCGCCGGCCGTGGCGACGGTGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/662834‑662685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgAAGCCGGTGGACCCCATGCGCAGGAAGCCCATCAGGCCGACCATGAAGGTGAACAAGGTGGCGCCCACGGCCACGGCGCCCAGTTGGTGGGCGTGCGGGAGATGACCGATGACCGTGCTGTCGACCAGCGCCACCAGCGGTACC  >  NC_002947/662722‑662865                                                                                                                                                                                                                                                                                                        GTCATCGGTCATCTCCCGCACGCCCACCAACTGGGCGCCGTGGCCGTGGGCGCCACCTTGTTCACCTTCATGGTCGGCCTGATGGGCTTCCTGCGCATGGGGTCCACCGGCTTCGCTGCCCAGGCCGCCGGCCGTGGCGACGGTGCAGC                                                                                                                                                   >  8:4632/1‑149                                                                                                         CACCGGCTTCGCTGCCCAGGCCGCCGGCCGTGGCGACGGTGCAGCGAAGCCGGTGGACCCCATGCGCAGGAAGCCCATCAGGCCGACCATGAAGGTGAACAAGGTGGCGCCCACGGCCACGGCGC                                                                   >  5:94538/1‑125                                                                                                         CACCGGCTTCGCTGCCCAGGCCGCCGGCCGTGGCGACGGTGCAGCGAAGCCGGTGGACCCCATGCGCAGGAAGCCCATCAGGCCGACCATGAAGGTGAACAAGGTGGCGCCCACGGCCACGGCGC                                                                   <  6:94538/125‑1                                                                                                                TTCGCTGCCCAGGCCGCCGGCCGTGGCGACGGTGCAGCGAAGCCGGTGGACCCCATGCGCAGGAAGCCCATCAGGCCGACCATGAAGGTGAACAAGGTGGCGCCCACGGCCACGGCGCCCAGTTGGTGGGCGTGCGGGAGATGACCGAT                                    >  7:160578/1‑149                                                                                                                                                  CAGCGAAGCCGGTGGACCCCATGCGCAGGAAGCCCATCAGGCCGACCATGAAGGTGAACAAGGTGGCGCCCACGGCCACGGCGCCCAGTTGGTGGGCGTGCGGGAGATGACCGATGACCGTGCTGTCGACCAGCGCCACCAGCGGTACC  <  7:66813/149‑1                                                                                                                                                  CAGCGAAGCCGGTGGACCCCATGCGCAGGAAGCCCATCAGGCCGACCATGAAGGTGAACAAGGTGGCGCCCACGGCCACGGCGCCCAGTTGGTG                                                         <  7:58977/94‑1                                                                                                                                                  CAGCGAAGCCGGTGGACCCCATGCGCAGGAAGCCCATCAGGCCGACCATGAAGGTGAACAAGGTGGCGCCCACGGCCACGGCGCCCAGTTGGTG                                                         >  8:58977/1‑94                                                                                                                                                                                                                                                                                                        GTCATCGGTCATCTCCCGCACGCCCACCAACTGGGCGCCGTGGCCGTGGGCGCCACCTTGTTCACCTTCATGGTCGGCCTGATGGGCTTCCTGCGCATGGGGTCCACCGGCTTCGCTGCCCAGGCCGCCGGCCGTGGCGACGGTGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/662834‑662685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgAAGCCGGTGGACCCCATGCGCAGGAAGCCCATCAGGCCGACCATGAAGGTGAACAAGGTGGCGCCCACGGCCACGGCGCCCAGTTGGTGGGCGTGCGGGAGATGACCGATGACCGTGCTGTCGACCAGCGCCACCAGCGGTACC  >  NC_002947/662722‑662865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.