| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 671140 = | 45 (1.070) | 4 (0.100) | 4/242 | NT | 10.1% | coding (195/1725 nt) | PP_0573 | hypothetical protein |
| ? | NC_002947 | 671177 = | 29 (0.730) | coding (232/1725 nt) | PP_0573 | hypothetical protein | |||||
GCGGCTGATAGTGTTCGCGCAGGTCGCCCAAGGGGAACACCGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/671291‑671140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggggcgGCTATCGACAACCCCGACTGGGCCCCGGCCAACACCCGGCTGGTGCTGCAAAAAGTGCGCTTCGAGGGCGGCACGGTGTTCCCCTTGGGCGACCTGCGCGAACACTATCAGCCGCTGATCGGGCGCGAAACCACGTTGGGTGAATTG > NC_002947/671177‑671323 GCGGCTGATAGTGTTCGCGCAGGTCGCCCAAGGGGAACACCGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGG > 6:263917/1‑149GCGGCTGATAGTGTTCGCGCAGGTCGCCCAAGGGGAACACCGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGG < 7:51942/149‑1 TGATAGTGTTCGCGCAGGTCGCCCAAGGGGAACACCGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGGGC < 5:144139/146‑1 TGATAGTGTTCGCGCAGGTCGCCCAAGGGGAACACCGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGGGC > 6:144139/1‑146 GCAGGTCGCCCAAGGGGAACACCGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGG < 3:170675/131‑1 GCAGGTCGCCCAAGGGGAACACCGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGG > 4:170675/1‑131 CGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGG > 7:38670/1‑109 CGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGG < 8:38670/109‑1 GCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGG < 7:180040/103‑1 GCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGG > 8:180040/1‑103 GATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGGGCGGCTATCGACAACCCCGACTGGGCCCCGGCCAACACCCGGCTGGTGCTGCAAAAAGTGCGCTTCGAGGGCGGCACGGTGTTCCCC < 3:144659/127‑1 GATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGGGCGGCTATCGACAACCCCGACTGGGCCCCGGCCAACACCCGGCTGGTGCTGCAAAAAGTGCGCTTCGAGGGCGGCACGGTGTTCCCC > 4:144659/1‑127 ATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGGGCGGCTATCGACAACCCCGACTGGGCCCCGGCCAACACCCGGCTGGTGCTGCAAAAAGTGCGCTTCGAGGGCGGCACGGTGTTCCCCTTGGGCGACCTGCGCGAACACT > 4:143009/1‑148 CCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGCGCGGCTATCGACAACCCCGACTGGGCCCCGGCCAACACCCGGCTGGTGCTGCAAAAAGTGCGCTTCGAGGGAGGCACGGTGTTACCCTTGGGAGACCTGAGCGAACACTATCAG > 6:216606/1‑149 AGGGGCGGATATCGACAACCCCGACTGGGCCCCGGCCAACACCCGTCTGGTGCTGCAAAAAGTGCGCTTCGAGGGCGGCACGGTGTTCCCCTTGGGCGACCTGCGCGAACACTATCAGCCGCTGATCGGGCGCGAAACCACGTTGTGTG < 5:216606/149‑1 CGGCTATCGACAACCCCGACTGGGCCCCGGCCAACACCCGGCTGGTGCTGCAAAAAGTGCGCTTCGAGGGCGGCACGGTGTTCCCCTTGGGCGACCTGCGCGAACACTATCAGCCGCTGATCGGGCGCGAAACCACGTTGGGTGAATTG > 8:142667/1‑149 GCGGCTGATAGTGTTCGCGCAGGTCGCCCAAGGGGAACACCGTGCCGCCCTCGAAGCGCACTTTTTGCAGCACCAGCCGGGTGTTGGCCGGGGCCCAGTCGGGGTTGTCGATAGCCGCCCCTGCCAACCGTATGCGGGGGCTCACAGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/671291‑671140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggggcgGCTATCGACAACCCCGACTGGGCCCCGGCCAACACCCGGCTGGTGCTGCAAAAAGTGCGCTTCGAGGGCGGCACGGTGTTCCCCTTGGGCGACCTGCGCGAACACTATCAGCCGCTGATCGGGCGCGAAACCACGTTGGGTGAATTG > NC_002947/671177‑671323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |