New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	674337 =	41 (0.970)	3 (0.080)	3/240	NT	7.0%	intergenic (‑229/+77)	PP_0575/PP_0576	membrane protein/lipoprotein
	?	NC_002947	674395 =	42 (1.070)					intergenic (‑287/+19)	PP_0575/PP_0576	membrane protein/lipoprotein

AGAACGCAACAGCGCAATCCGCAATACCGTGGCCAAGGTGCTGGGCAACTACCCACCGGGCAGCAAAAAATAGCGTTGGAACGCGGCTTTTGCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/674486‑674337 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgcatgCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTT  >  NC_002947/674395‑674487                                                                                                                                                                                                                                                     AGAACGCAACAGCGCAATCCGCAATACCGTGGCCAAGGTGCTGGGCAACTACCCACCGGGCAGCAAAAAATAGCGTTGGAACGCGGCTTTTGCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCAT                                                                                                <  6:238209/149‑1                                                 CTACCCACCGGGCAGCAAAAAATAGCGTTGGAACGCGGCTTTTGCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCA                                                                                                 <  5:145214/100‑1                                                 CTACCCACCGGGCAGCAAAAAATAGCGTTGGAACGCGGCTTTTGCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCA                                                                                                 >  6:145214/1‑100                                                                                            GCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTG                                                                  <  1:189228/88‑1                                                                                            GCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTG                                                                  >  2:189228/1‑88                                                                                               TGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTT  >  2:1532/1‑149                                                                                                                                                                                                                                                     AGAACGCAACAGCGCAATCCGCAATACCGTGGCCAAGGTGCTGGGCAACTACCCACCGGGCAGCAAAAAATAGCGTTGGAACGCGGCTTTTGCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/674486‑674337 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgcatgCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTT  >  NC_002947/674395‑674487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.