New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	674337 =	41 (0.970)	3 (0.080)	3/240	NT	7.0%	intergenic (‑229/+77)	PP_0575/PP_0576	membrane protein/lipoprotein
	?	NC_002947	674395 =	42 (1.070)					intergenic (‑287/+19)	PP_0575/PP_0576	membrane protein/lipoprotein

ACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCGGCACTGCCGC  >  NC_002947/674251‑674532                                                                                                                                                 |                                                                                                                                          acaGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCaaaa                                                                                                                                       <  8:103463/149‑1 (MQ=255)   aggccaggccGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCaaaa                                                                                                                                       <  2:270353/147‑1 (MQ=255)   aggccaggccGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCaaaa                                                                                                                                       >  1:270353/1‑147 (MQ=255)             ggTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCaa                                                                                                                           >  2:210907/1‑149 (MQ=255)             ggTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCaa                                                                                                                           >  4:211859/1‑149 (MQ=255)                   gCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTAt                                                                                                                     >  3:62890/1‑149 (MQ=255)                         gTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTAtttttt                                                                                                                <  4:62890/148‑1 (MQ=255)                          tACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTtgc                                                                                                              >  2:141991/1‑149 (MQ=255)                               gTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGCCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTtgctgc                                                                                                           <  1:190086/147‑1 (MQ=255)                                  aTCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGt                                                                                                      >  4:207880/1‑149 (MQ=255)                                       cATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTa                                                                                                 <  3:207880/149‑1 (MQ=255)                                          cTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGtt                                                                                              >  5:163736/1‑149 (MQ=255)                                             tGTAGGCGTGGGGTCACCCGCGAACATCCGCGCAGCCGGTGCCATCCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGtt                                                                                              <  6:149542/146‑1 (MQ=255)                                             tGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGt                                                                                               <  1:162641/145‑1 (MQ=255)                                               tAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCa                                                                                         <  7:50067/149‑1 (MQ=255)                                                aGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAg                                                                                                <  3:101942/141‑1 (MQ=255)                                                aGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAg                                                                                                >  4:101942/1‑141 (MQ=255)                                                       gggTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTg                                                                                 <  3:79774/149‑1 (MQ=255)                                                        ggTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCTGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTgg                                                                                <  2:247676/149‑1 (MQ=255)                                                          caaaaaatagcgttggaacgcggcttttgCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGtgcatgc                                                                                                                                           >  2:189228‑M1/30‑88 (MQ=255)                                                          caaaaaatagcgttggaacgcggcttttgCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGtgcatgc                                                                                                                                           <  1:189228‑M1/59‑1 (MQ=255)                                                              ccGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTg                                                                                                     >  2:146536/1‑122 (MQ=255)                                                              ccGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTg                                                                                                     <  1:146536/122‑1 (MQ=255)                                                              ccGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAg                                                                                        >  1:225528/1‑135 (MQ=255)                                                              ccGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAg                                                                                        <  2:225528/135‑1 (MQ=255)                                                                gcgAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTa                                                                        >  3:251594/1‑149 (MQ=255)                                                                           cgAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTgc                                                             >  7:250091/1‑149 (MQ=255)                                                                            gAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTgcg                                                            >  1:220930/1‑149 (MQ=255)                                                                               gCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTg                                                         >  5:219359/1‑149 (MQ=255)                                                                                 cGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGtt                                                       <  3:10135/149‑1 (MQ=255)                                                                                  ggTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTg                                                      >  1:126027/1‑149 (MQ=255)                                                                                      gcatgcaccgtggcccggcgggagcgggtttacccgcgaagcaattggcccggtgcatgCAAAAGCCGCGTTCCAACGCTATTTTTtg                                                                                                               >  2:189228‑M2/60‑88 (MQ=255)                                                                                      gcatgcaccgtggcccggcgggagcgggtttacccgcgaagcaattggcccggtgcatgCAAAAGCCGCGTTCCAACGCTATTTTTtg                                                                                                               <  1:189228‑M2/29‑1 (MQ=255)                                                                                        ATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGttct                                                <  6:238209‑M1/149‑1 (MQ=255)                                                                                         tgcaccgtggcccggcgggagcgggtttacccgcgaagcaattggcccggtgcatgCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGttctt                                               >  2:1532‑M2/57‑149 (MQ=255)                                                                                         TGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAg                                                                                                <  5:145214‑M1/100‑1 (MQ=255)                                                                                         TGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAg                                                                                                >  6:145214‑M1/1‑100 (MQ=255)                                                                                                  ccAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTg                                      >  1:155679/1‑149 (MQ=255)                                                                                                    aaTTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGc                                    <  1:141991/149‑1 (MQ=255)                                                                                                         cTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTa                               <  5:238209/149‑1 (MQ=255)                                                                                                            cgcgGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAg                              <  4:251594/147‑1 (MQ=255)                                                                                                            cgcgGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAg                              <  2:155679/147‑1 (MQ=255)                                                                                                             gcgGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAgtt                            <  7:65195/148‑1 (MQ=255)                                                                                                             gcgGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAgtt                            <  2:126027/148‑1 (MQ=255)                                                                                                              cgGGTAAACCCGCTCCCGCCGTGCCACGGTGCTTGCAATAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGGTGTTGCGTTCTTCCGGGCTTGGCGGGTAgttgt                          <  5:247724/149‑1 (MQ=255)                                                                                                              cgGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCggg                                          >  5:817/1‑133 (MQ=255)                                                                                                              cgGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCggg                                          <  6:817/133‑1 (MQ=255)                                                                                                                 gTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCa                       <  7:120965/149‑1 (MQ=255)                                                                                                                   aaaCCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAACACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCTTTCTTACGGGCTAGGCGGGTAGTTGTTCAt                      >  6:184235/1‑148 (MQ=255)                                                                                                                       ccGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCt                 >  7:149707/1‑149 (MQ=255)                                                                                                                          cTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCt              <  6:219359/149‑1 (MQ=255)                                                                                                                             ccgccgGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCgg           <  3:211859/149‑1 (MQ=255)                                                                                                                             ccgccgGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCgg           <  1:210907/149‑1 (MQ=255)                                                                                                                                    gCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGTGTAGTTGCCCAACACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCTGGCTTGGCGGGTAGTTGTTCATGATCTGCTCGGCACTGcc    <  5:184235/149‑1 (MQ=255)                                                                                                                                     ccACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCGGCACTGCcg   <  6:163736/149‑1 (MQ=255)                                                                                                                                      cACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCGGCACTGCcgc  <  8:149707/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                          ACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCGGCACTGCCGC  >  NC_002947/674251‑674532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.