New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	674337 =	41 (0.970)	3 (0.080)	3/240	NT	7.0%	intergenic (‑229/+77)	PP_0575/PP_0576	membrane protein/lipoprotein
	?	NC_002947	674395 =	42 (1.070)					intergenic (‑287/+19)	PP_0575/PP_0576	membrane protein/lipoprotein

GGGGAGTGCGGTTGGCATCGGAAAAAAGGCGTGCGTGGAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTG  >  NC_002947/674191‑674480                                                                                                                                                   |                                                                                                                                                gtggATTGCGGTTGTCATCGTAAATAACTCGTGCGTGGAATGGATTTTGTCGTAGCTGACACAGGGCTGGCCGGTGACGCAGTCGTACTCGTTATGGCCATCTTTGTAGGCGTGGGGTCACCCGGGAATATGCGCGTAGCCGGTGCCAt                                                                                                                                               <  6:141167/147‑1 (MQ=255)    gAGTGCGGTTGGCATCGGAAAAAAGGCGTGCGTGGAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCa                                                                                                                                            >  8:50067/1‑149 (MQ=255)         cGGTTGGCATCGGAAAAAAGGCGTGCGTGGAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCggg                                                                                                                                       <  6:121873/149‑1 (MQ=255)          gggtGGCATCGGAAAAAAGGCGTGCGTGGAATGGATTTTGTCGTAGCTGATTCTGGCCAGGACGGTGACGCAGTCGGACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCATGGCACCggct                                                                                                                                      <  1:89482/146‑3 (MQ=255)          ggTTGGCATCGGAAAAAAGGCGTGCGTGGAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGc                                                                                                                                      <  8:119537/149‑1 (MQ=255)                 aTCGGAAAAAAGGCGTGCGTGGAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGc                                                                                                                               >  7:103463/1‑149 (MQ=255)                     gAAAAAAGGCGTGCGTGGAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTAGGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTcg                                                                                                                           >  6:247724/1‑149 (MQ=255)                       aaaaaGGCGTGCGTGGAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTcgcg                                                                                                                         >  8:65195/1‑149 (MQ=255)                                  cgtgGAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGc                                                                                                              >  2:162641/1‑149 (MQ=255)                                     ggAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTcc                                                                                                           >  2:190086/1‑149 (MQ=255)                                        aTGGATTTTGTAGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCAAATTGCTTCGCGGGTAAACCCGCTCccgc                                                                                                        >  4:79774/1‑149 (MQ=255)                                           gATTTTGGCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCgg                                                                                                     <  7:151406/149‑1 (MQ=255)                                                      aagaacgcaacagcgcaatccgcaataccgtggccaaggtgctgggcaactacccaccgggcagcaaaaaatagcgttggaacgcggcttttgCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGtgca                                                                                          >  2:1532‑M1/94‑149 (MQ=255)                                                             acaGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCaaaa                                                                                   <  8:103463/149‑1 (MQ=255)                                                               aggccaggccGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCaaaa                                                                                   <  2:270353/147‑1 (MQ=255)                                                               aggccaggccGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCaaaa                                                                                   >  1:270353/1‑147 (MQ=255)                                                                         ggTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCaa                                                                       >  2:210907/1‑149 (MQ=255)                                                                         ggTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCaa                                                                       >  4:211859/1‑149 (MQ=255)                                                                          gTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTcg                                                                                                                           <  3:181527/96‑1 (MQ=255)                                                                          gTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTcg                                                                                                                           >  4:181527/1‑96 (MQ=255)                                                                               gCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTAt                                                                 >  3:62890/1‑149 (MQ=255)                                                                                     gTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTAtttttt                                                            <  4:62890/148‑1 (MQ=255)                                                                                      tACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTtgc                                                          >  2:141991/1‑149 (MQ=255)                                                                                           gTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGCCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTtgctgc                                                       <  1:190086/147‑1 (MQ=255)                                                                                              aTCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGt                                                  >  4:207880/1‑149 (MQ=255)                                                                                                   cATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTa                                             <  3:207880/149‑1 (MQ=255)                                                                                                      cTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGtt                                          >  5:163736/1‑149 (MQ=255)                                                                                                         tGTAGGCGTGGGGTCACCCGCGAACATCCGCGCAGCCGGTGCCATCCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGtt                                          <  6:149542/146‑1 (MQ=255)                                                                                                         tGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGt                                           <  1:162641/145‑1 (MQ=255)                                                                                                           tAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCa                                     <  7:50067/149‑1 (MQ=255)                                                                                                            aGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAg                                            >  4:101942/1‑141 (MQ=255)                                                                                                            aGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAg                                            <  3:101942/141‑1 (MQ=255)                                                                                                                   gggTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTg                             <  3:79774/149‑1 (MQ=255)                                                                                                                    ggTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCTGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTgg                            <  2:247676/149‑1 (MQ=255)                                                                                                                      caaaaaatagcgttggaacgcggcttttgCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGtgcatgc                                                                                       >  2:189228‑M1/30‑88 (MQ=255)                                                                                                                      caaaaaatagcgttggaacgcggcttttgCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGtgcatgc                                                                                       <  1:189228‑M1/59‑1 (MQ=255)                                                                                                                          ccGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTg                                                 <  1:146536/122‑1 (MQ=255)                                                                                                                          ccGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTg                                                 >  2:146536/1‑122 (MQ=255)                                                                                                                          ccGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAg                                    <  2:225528/135‑1 (MQ=255)                                                                                                                          ccGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAg                                    >  1:225528/1‑135 (MQ=255)                                                                                                                            gcgAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTa                    >  3:251594/1‑149 (MQ=255)                                                                                                                                       cgAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTgc         >  7:250091/1‑149 (MQ=255)                                                                                                                                        gAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTgcg        >  1:220930/1‑149 (MQ=255)                                                                                                                                           gCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTg     >  5:219359/1‑149 (MQ=255)                                                                                                                                             cGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGtt   <  3:10135/149‑1 (MQ=255)                                                                                                                                              ggTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTg  >  1:126027/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                GGGGAGTGCGGTTGGCATCGGAAAAAAGGCGTGCGTGGAATGGATTTTGTCGTAGCTGACACAGGCCAGGCCGGTGACGCAGTCGTACTCGTAATCGCCATCTATGTAGGCGTGGGGTCACCCGCGAACATCCGCGAAGCCGGTGCCATGCACCGGGCCAATTGCTTCGCGGGTAAACCCGCTCCCGCCGGGCCACGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTG  >  NC_002947/674191‑674480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.