New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 735469	44 (1.040)	4 (0.100)	4/244	NT	8.5%	coding (106/174 nt)	PP_0627	hypothetical protein
	?	NC_002947	= 735508	44 (1.100)					coding (67/174 nt)	PP_0627	hypothetical protein

ATGGGAATATCTCATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/735315‑735469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcacCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGGCCGTGACCATCGGGTTGGGTCTCATCAGCCGCCTGCTGAGTGGACTGGTGCTATGAGCTGCTTCGCGCTCGCCCTCCCCTCGTGCAGTTTGCGGCC  <  NC_002947/735508‑735361                                                                                                                                                                                                                                                                                                                 ATGGGAATATCTCATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCAC                                                                                                                                                            >  4:24981/1‑149   GGGAATATCTCATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCA                                                                                                                                                          >  4:37622/1‑149    GGAATATCTCATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAG                                                                                                                                                         >  6:224405/1‑149                         GGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGACACGGCCAGCACCAGCACCAAGTCGAGCGCAGGCCC                                                                                                                                    >  3:254397/1‑149                                                 CCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTG                                                                                                            <  3:24866/149‑1                                                    CAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTG                                                                                                         <  3:93262/149‑1                                                           gACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCT                                                                                                    <  4:254397/146‑1                                                                                                                                                      CAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGGCCGTGACCATCGGGTTGGGTCTCATCAGCCGCCTGCTGAGTGGACTGGTGCTATGAGCTGCTTCGCGCTCGCCCTCCCCTCGTGCAGTTTG       >  4:131636/1‑149                                                                                                                                                           CCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGGCCGTGACCATCGGGTTGGGTCTCATCAGCCGCCTGCTGAGTGGACTGGTGCTATGAGCTGCTTCGCGCTCGCCCTCCCCTCGTGCAGTTTGCGGCC  <  3:104720/149‑1                                                                                                                                                                                                                                                                                                                 ATGGGAATATCTCATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/735315‑735469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcacCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGGCCGTGACCATCGGGTTGGGTCTCATCAGCCGCCTGCTGAGTGGACTGGTGCTATGAGCTGCTTCGCGCTCGCCCTCCCCTCGTGCAGTTTGCGGCC  <  NC_002947/735508‑735361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.