New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 73546944 (1.040)4 (0.100) 4/244 NT 8.5% coding (106/174 nt) PP_0627 hypothetical protein
?NC_002947 = 735508 44 (1.100)coding (67/174 nt) PP_0627 hypothetical protein

CTCATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCT  >  NC_002947/735325‑735616
                                                                                                                                                |                                                                                                                                                    
ctcATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAg                                                                                                                                                   >  3:234314/1‑148 (MQ=255)
ctcATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGAGGAGACCCACCCCGATGGGCCCGGCCAGCACCAGCACAAg                                                                                                                                                   >  6:223803/1‑148 (MQ=255)
 tcATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAg                                                                                                                                                   >  4:115660/1‑147 (MQ=255)
 tcATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAg                                                                                                                                                   <  3:115660/147‑1 (MQ=255)
   attaGGTTTACGGAATTCGTGGCCATGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAg                                                                                                                                                   <  8:212756/142‑1 (MQ=255)
   aTAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAg                                                                                                                                                   <  4:182506/145‑1 (MQ=255)
   aTAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAg                                                                                                                                                   <  5:224405/145‑1 (MQ=255)
   aTAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGagc                                                                                                                                               >  7:94578/1‑149 (MQ=255)
   aTAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGag                                                                                                                                                >  6:232184/1‑148 (MQ=255)
       ggTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGcc                                                                                                                                           <  3:37622/149‑1 (MQ=255)
          ttACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACg                                                                                                                                        >  3:131636/1‑149 (MQ=255)
           tACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGagc                                                                                                                                               >  7:129302/1‑141 (MQ=255)
           tACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGagc                                                                                                                                               <  8:129302/141‑1 (MQ=255)
              ggAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGACACGGCCAGCACCAGCACcaagtcgagcgcaggccc                                                                                                                                    >  3:254397‑M1/1‑131 (MQ=255)
                              ggggCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTc                                                                                                                    >  4:18429/1‑148 (MQ=255)
                                   cggccgCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTg                                                                                                              <  2:224062/149‑1 (MQ=255)
                                    ggCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGg                                                                                                             <  3:104720‑M2/149‑2 (MQ=255)
                                      ccgCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACcaagtcgagcgcaggcccttccggccgtggctgctccttgtg                                                                                                            <  3:24866‑M1/149‑43 (MQ=255)
                                       cgCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTg                                                                                                              >  6:246971/1‑145 (MQ=255)
                                       cgCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTg                                                                                                              <  5:246971/145‑1 (MQ=255)
                                         cAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACcaagtcgagcgcaggcccttccggccgtggctgctccttgtgctg                                                                                                         <  3:93262‑M1/149‑46 (MQ=255)
                                         cAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGgtgctg                                                                                                        >  4:131636‑M2/1‑143 (MQ=255)
                                             cTGCACGAGGGGCGGGCGAGCGCGAAGCAGCTCATAGCACCCGGCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGGCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTggggg                                                                                                    <  5:223803/149‑1 (MQ=255)
                                             cTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTggggg                                                                                                    <  3:18429/149‑1 (MQ=255)
                                             cTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTggggg                                                                                                    <  8:226333/149‑1 (MQ=255)
                                                gacGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACcaagtcgagcgcaggcccttccggccgtggctgctccttgtgctggtgct                                                                                                    <  4:254397‑M1/146‑51 (MQ=255)
                                                cACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCt                                                                                                 >  6:52330/1‑149 (MQ=255)
                                                 aCGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTc                                                                                                >  8:132739/1‑149 (MQ=255)
                                                        gagggCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATa                                                                                         <  7:199699/149‑1 (MQ=255)
                                                              gAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATc                                                                                   <  8:94578/149‑1 (MQ=255)
                                                                         agcTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCt                                                                        <  5:52330/149‑1 (MQ=255)
                                                                                   aCCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCg                                                               <  7:174091/148‑1 (MQ=255)
                                                                                   aCCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCg                                                               >  8:174091/1‑148 (MQ=255)
                                                                                        tCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCa                                                         <  5:90740/149‑1 (MQ=255)
                                                                                          cACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAgg                                                       <  4:234314/149‑1 (MQ=255)
                                                                                            cTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGc                                                      >  1:54805/1‑148 (MQ=255)
                                                                                             tCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGa                                                    >  7:251480/1‑149 (MQ=255)
                                                                                                gcagGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTg                                                 <  2:221881/149‑1 (MQ=255)
                                                                                                      ggcTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCAtg                                           >  5:130843/1‑149 (MQ=255)
                                                                                                                aCCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCTGGTTCAGGCGACTGGTCAtgg                                          <  2:13146/140‑1 (MQ=255)
                                                                                                                aCCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCAGGTTCAGGCGACTGGTCAtgg                                          >  1:13146/1‑140 (MQ=255)
                                                                                                                 cccAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTc                                              >  1:159636/1‑135 (MQ=255)
                                                                                                                  ccAAGCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTc                               <  3:24981/149‑1 (MQ=255)
                                                                                                                  ccAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCt                                                                                                                           >  2:67148/1‑58 (MQ=255)
                                                                                                                    aaCCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAg                             <  2:54805/149‑1 (MQ=255)
                                                                                                                     aCCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCt                                                                   <  8:129244/110‑1 (MQ=255)
                                                                                                                     aCCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCt                                                                   >  7:129244/1‑110 (MQ=255)
                                                                                                                          aTGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGAc                       <  6:130843/149‑1 (MQ=255)
                                                                                                                              tCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                   <  8:251480/149‑1 (MQ=255)
                                                                                                                              tCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCGCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                   <  7:132739/149‑1 (MQ=255)
                                                                                                                              tCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGCGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                   <  5:232184/149‑1 (MQ=255)
                                                                                                                                aCGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTtgt                 >  3:88676/1‑149 (MQ=255)
                                                                                                                                    ccagcaccagcaCAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                   <  4:118220/143‑1 (MQ=255)
                                                                                                                                    ccagcaccagcaCAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                   >  3:118220/1‑143 (MQ=255)
                                                                                                                                    ccagcaccagcaCAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGCTTCAGGCGACTGGTCATCGTGGGCCTCGTCATGAAGACGTTTGTGaat             >  8:84438/1‑147 (MQ=255)
                                                                                                                                      agcaccagcacAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGgtgctggtgctggccgtgaccatcgggttgggtctcatcagccgcctgctgagtggactggtgctatgagctgcttcgcgctcgccctcccctcgtc             <  4:254397‑M2/147‑98 (MQ=255)
                                                                                                                                           cagcaccaagtcgagcgcaggcccttccggccgtggctgctccttgtgctggtgctggccgtgaccatcgggttgggtctcatcagccgcctgctgagtggactggtgctatgagctgcttcgcgctcgccctcccctcgtgcagtttg       >  4:131636‑M1/1‑6 (MQ=255)
                                                                                                                                           cagcacAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGgtgctggtgctggccgtgaccatcgggttgggtctcatcagccgcctgctgagtggactggtgctatgagctgcttcgcgctcgccctcccctcgtgcagtttg      <  3:93262‑M2/149‑105 (MQ=255)
                                                                                                                                           cagcacAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCaaa      >  2:34629/1‑149 (MQ=255)
                                                                                                                                           cagcacAAGGAGCAGCCACGGCCGGAAGGGACTGCGCTCGACATGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTGCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGGAGCCGGTTGTGAATGCGCcaa      >  8:129023/1‑149 (MQ=255)
                                                                                                                                             gcacAAGGAGCAGCCACGGCCGGAAGGGCCTGCGGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCGAAc     >  1:36227/1‑149 (MQ=255)
                                                                                                                                             gcacAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACg    >  1:5604/1‑149 (MQ=255)
                                                                                                                                              cacaAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGgtgctggtgctggccgtgaccatcgggttgggtctcatcagccgcctgctgagtggactggtgctatgagctgcttcgcgctcgccctcccctcgtgcagtttgcgg   <  3:24866‑M2/149‑108 (MQ=255)
                                                                                                                                               acaAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGc   >  2:156133/1‑148 (MQ=255)
                                                                                                                                                ccaagtcgagcgcaggcccttccggccgtggctgctccttgtgctggtgctggccgtgaccatcgggttgggtctcatcagccgcctgctgagtggactggtgctatgagctgcttcgcgctcgccctcccctcgtgcagtttgcggcc  <  3:104720‑M1/149‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
CTCATAAGGTTTACGGAATTCGTGGCCCTGGGGGCCGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCT  >  NC_002947/735325‑735616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.