New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 735469	44 (1.040)	4 (0.100)	4/244	NT	8.5%	coding (106/174 nt)	PP_0627	hypothetical protein
	?	NC_002947	= 735508	44 (1.100)					coding (67/174 nt)	PP_0627	hypothetical protein

CGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCT  >  NC_002947/735360‑735655                                                                                                                                                      |                                                                                                                                                    cggccgCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTg                                                                                                                                                     <  2:224062/149‑1 (MQ=255)  ggCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGg                                                                                                                                                    <  3:104720‑M2/149‑2 (MQ=255)     cgCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTg                                                                                                                                                     >  6:246971/1‑145 (MQ=255)     cgCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTg                                                                                                                                                     <  5:246971/145‑1 (MQ=255)       cAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGgtgctg                                                                                                                                               >  4:131636‑M2/1‑143 (MQ=255)           cTGCACGAGGGGCGGGCGAGCGCGAAGCAGCTCATAGCACCCGGCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGGCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTggggg                                                                                                                                           <  5:223803/149‑1 (MQ=255)           cTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTggggg                                                                                                                                           <  8:226333/149‑1 (MQ=255)           cTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTggggg                                                                                                                                           <  3:18429/149‑1 (MQ=255)              cACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCt                                                                                                                                        >  6:52330/1‑149 (MQ=255)               aCGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTc                                                                                                                                       >  8:132739/1‑149 (MQ=255)                      gagggCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATa                                                                                                                                <  7:199699/149‑1 (MQ=255)                            gAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATc                                                                                                                          <  8:94578/149‑1 (MQ=255)                                       agcTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCt                                                                                                               <  5:52330/149‑1 (MQ=255)                                                 aCCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCg                                                                                                      >  8:174091/1‑148 (MQ=255)                                                 aCCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCg                                                                                                      <  7:174091/148‑1 (MQ=255)                                                      tCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCa                                                                                                <  5:90740/149‑1 (MQ=255)                                                        cACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAgg                                                                                              <  4:234314/149‑1 (MQ=255)                                                          cTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGc                                                                                             >  1:54805/1‑148 (MQ=255)                                                           tCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGa                                                                                           >  7:251480/1‑149 (MQ=255)                                                              gcagGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTg                                                                                        <  2:221881/149‑1 (MQ=255)                                                                    ggcTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCAtg                                                                                  >  5:130843/1‑149 (MQ=255)                                                                              aCCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCTGGTTCAGGCGACTGGTCAtgg                                                                                 <  2:13146/140‑1 (MQ=255)                                                                              aCCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCAGGTTCAGGCGACTGGTCAtgg                                                                                 >  1:13146/1‑140 (MQ=255)                                                                               cccAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTc                                                                                     >  1:159636/1‑135 (MQ=255)                                                                                ccAAGCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTc                                                                      <  3:24981/149‑1 (MQ=255)                                                                                  aaCCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAg                                                                    <  2:54805/149‑1 (MQ=255)                                                                                   aCCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCt                                                                                                          <  8:129244/110‑1 (MQ=255)                                                                                   aCCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCt                                                                                                          >  7:129244/1‑110 (MQ=255)                                                                                        aTGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGAc                                                              <  6:130843/149‑1 (MQ=255)                                                                                            tCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                                                          <  8:251480/149‑1 (MQ=255)                                                                                            tCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCGCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                                                          <  7:132739/149‑1 (MQ=255)                                                                                            tCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGCGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                                                          <  5:232184/149‑1 (MQ=255)                                                                                              aCGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTtgt                                                        >  3:88676/1‑149 (MQ=255)                                                                                                  ccagcaccagcaCAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                                                          <  4:118220/143‑1 (MQ=255)                                                                                                  ccagcaccagcaCAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGttt                                                          >  3:118220/1‑143 (MQ=255)                                                                                                  ccagcaccagcaCAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGCTTCAGGCGACTGGTCATCGTGGGCCTCGTCATGAAGACGTTTGTGaat                                                    >  8:84438/1‑147 (MQ=255)                                                                                                    agcaccagcacAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGgtgctggtgctggccgtgaccatcgggttgggtctcatcagccgcctgctgagtggactggtgctatgagctgcttcgcgctcgccctcccctcgtc                                                    <  4:254397‑M2/147‑98 (MQ=255)                                                                                                         cagcacAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGgtgctggtgctggccgtgaccatcgggttgggtctcatcagccgcctgctgagtggactggtgctatgagctgcttcgcgctcgccctcccctcgtgcagtttg                                             <  3:93262‑M2/149‑105 (MQ=255)                                                                                                         cagcacAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCaaa                                             >  2:34629/1‑149 (MQ=255)                                                                                                         cagcacAAGGAGCAGCCACGGCCGGAAGGGACTGC‑GCTCGACATGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTGCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGGAGCCGGTTGTGAATGCGCcaa                                             >  8:129023/1‑149 (MQ=255)                                                                                                           gcacAAGGAGCAGCCACGGCCGGAAGGGCCTGCGGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCGAAc                                            >  1:36227/1‑149 (MQ=255)                                                                                                           gcacAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACg                                           >  1:5604/1‑149 (MQ=255)                                                                                                            cacaAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGgtgctggtgctggccgtgaccatcgggttgggtctcatcagccgcctgctgagtggactggtgctatgagctgcttcgcgctcgccctcccctcgtgcagtttgcgg                                          <  3:24866‑M2/149‑108 (MQ=255)                                                                                                             acaAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGc                                          >  2:156133/1‑148 (MQ=255)                                                                                                                 ggAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAg                                     >  6:71946/1‑149 (MQ=255)                                                                                                                  gAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGc                                    >  5:212084/1‑149 (MQ=255)                                                                                                                     cagcCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGtt                                 >  5:186706/1‑149 (MQ=255)                                                                                                                       gcCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTcg                               >  1:163053/1‑149 (MQ=255)                                                                                                                        ccACGGCCGGCAGGCCCTGC‑GCTCGACTTGTTGATGGGGGGCTCGCAGATACTCATCGACCCGCCGCTGCTCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTcgc                              <  8:108354/149‑1 (MQ=255)                                                                                                                          aCGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTcgcg                             >  7:221910/1‑148 (MQ=255)                                                                                                                           cGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCGAACGCTGTAGCGTTTGCGCa                           <  2:36227/149‑1 (MQ=255)                                                                                                                                  aaGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCtt                    <  4:88676/149‑1 (MQ=255)                                                                                                                                    gggCCTGC‑GCTCGACTTGgtgctggtgctggccgtgtccatcgggttgggtctcatcagccgcctgctgagtggactggtgctatgagctgcttcgcgctcgccctcccctcgtgcagtttgcggccggcccccagggccacgaattcc                  >  3:254397‑M2/1‑18 (MQ=255)                                                                                                                                          gc‑gcTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACaaa            >  5:76922/1‑149 (MQ=255)                                                                                                                                              cTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGa         <  8:221910/149‑1 (MQ=255)                                                                                                                                                 gACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATaa      >  5:57495/1‑149 (MQ=255)                                                                                                                                                      ggTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCt  <  6:212084/148‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    CGGCCGCAAACTGCACGAGGGGAGGGCGAGCGCGAAGCAGCTCATAGCACCAGTCCACTCAGCAGGCGGCTGATGAGACCCAACCCGATGGTCACGGCCAGCACCAGCACAAGGAGCAGCCACGGCCGGAAGGGCCTGC‑GCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCT  >  NC_002947/735360‑735655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.