New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 937436	51 (1.210)	3 (0.070)	3/248	NT	6.2%	coding (8186/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 937482	42 (1.040)					coding (8140/18933 nt)	PP_0806	surface adhesion protein

CTGGCCCCCACCACGACACTGCCCAGTACAGTGGTGCCATCGGCGGCCAGCACACGGACGGTGCTGCCTGCTTCGGCGCGGCCGCTGACGACGGTACCGTCGCCACTGATTGCCAGATCGCTTGGCGCCACAGGCGCGGTGATGTCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/937286‑937436 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgGCGATCGACAACAACGGCACCTCGTCGTTGCCGGTGCAGGTCGCCGCACCAGACA  <  NC_002947/937482‑937428                                                                                                                                                                                                                CTGGCCCCCACCACGACACAGCCCAGTACAGTGGTGCCATCGGCGGCCAGCACCCGGACGGTGCTGCCTGCTTCGGCGCGGCCGCTGACGACCGTACCGTCGCCACTGATTGCCAGATAGCTTTGCCCCACAGGCGCGGTGATGTCTGG                                                           >  8:91685/1‑149                                                 AGCACACGGACGGTGCTGCCTGCTTCGGCGCGGCCGCTGACGACGGTACCGTCGCCACTGATTGCCAGATCGCTTGGCGCCACAGGCGCGGTGATGTCTGGTGGCGATCGACAACAACGGCACCTCGTCGTTGCCGGTGCAGGTCGCCG           >  1:212984/1‑149                                                         GACGGTGCTGCCTGCTTCGGCGCGGCCGCTGACGACGGTACCGTCGCCACTGATTGCCAGATCGCTTGGCGCCACAGGCGCGGTGATGTCTGGTGGCGATCGACAACAACGGCACCTCGTCGTTGCCGGTGCAGGTCGCCGCACCAGAC   <  2:212984/149‑1                                                          ACGGTGCGGCCTGCTTCGGCGCGGCCGCTGACGACGGTACCGTCGCCACTGATTGCCAGATCGCTTGGCGCCACACGCGCGGTGATGTCTGGTGGCGATCGACAACAACGGCACCTCGTCGTTGCCGGTGCAGGTCGCCGCACCAGACA  <  7:179384/149‑1                                                                          CGGCGCGGCCGCTGACGACGGTACCGTCGCCACTGATTGCCAGATCGCTTGGCGCCACAGGCGCGGTGATGTCTG                                                            <  5:25867/75‑1                                                                          CGGCGCGGCCGCTGACGACGGTACCGTCGCCACTGATTGCCAGATCGCTTGGCGCCACAGGCGCGGTGATGTCTG                                                            <  7:27698/75‑1                                                                          CGGCGCGGCCGCTGACGACGGTACCGTCGCCACTGATTGCCAGATCGCTTGGCGCCACAGGCGCGGTGATGTCTG                                                            >  8:27698/1‑75                                                                          CGGCGCGGCCGCTGACGACGGTACCGTCGCCACTGAATGCCAGATCGCTTGGCGCCACAGGCGCGGTGATGTCTG                                                            >  6:25867/1‑75                                                                                                                                                                                                                CTGGCCCCCACCACGACACTGCCCAGTACAGTGGTGCCATCGGCGGCCAGCACACGGACGGTGCTGCCTGCTTCGGCGCGGCCGCTGACGACGGTACCGTCGCCACTGATTGCCAGATCGCTTGGCGCCACAGGCGCGGTGATGTCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/937286‑937436 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgGCGATCGACAACAACGGCACCTCGTCGTTGCCGGTGCAGGTCGCCGCACCAGACA  <  NC_002947/937482‑937428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.