| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 960092 = | 41 (0.970) | 3 (0.070) | 3/246 | NT | 6.8% | coding (361/411 nt) | PP_0821 | hypothetical protein |
| ? | NC_002947 | 960124 = | 43 (1.070) | coding (393/411 nt) | PP_0821 | hypothetical protein | |||||
ACCCGCGAAGAAGGCCACGCGGAGCATGACACCGGCAAAGCCGGTGTTCGCGGCTGAACCCGCGCCTGCAAATGTGGGCCAATCATGCCTGAACAGGCGCTACTGCCCAGGGCTAAGCACCCGCTCCAGTTCCGCAGCGCGGTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/960241‑960092‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtGCTTAGCCCTGGGCAGTAGCGCCTGTTCAGGCATGATTGGCCCACATTTGCAGGCGCGGGTTCAGCCGCGAACACCGGCTTTGCCGGTGTCATGCTCCGCGTGG > NC_002947/960124‑960227 ACCCGCGAAGAAGGCCACGCGGAGCATGACACCGGCAAAGCCGGTGTTCGCGGCTGAACCCGCGCCTGCAAATGTGGGCCAATCATGCCTGAACAGGCGCTACTGCCCAGGGCTAAGCACCCGCTCCAGTTCCGCAGCGCGGTCGCGG < 2:259213/148‑1ACCCGCGAAGAAGGCCACGCGGAGCATGACACCGGCAAAGCCGGTGTTCGCGGCTGAACCCGCGCCTGCAAATGTGGGCCAATCATGCCTGAACAGGCGCTACTGCCCAGGGCTAAGCACCCGCTCCAGTTCCGCAGCGCGGTCGCGG < 5:240293/148‑1 CCGCGAAGAAGGCCACGCGGAGCATGACACCGGCAAAGCCGGTGTTCGCGGCTGAACCCGCGCCTGCAAATGTGGGCCAATCATGCCTGAACAGGCGCTACTGCCCAGGGCTAAGCACCCGCTCCAGTTCCGCAGCGCGGTCGCGGGT > 2:98627/1‑148 CCGCGAAGAAGGCCACGCGGAGCATGACACCGGCAAAGCCGGTGTTCGCGGCTGAACCCGCGCCTGCAAATGTGGGCCAATCATGCCTGAACAGGCGCTACTGCCCAGGGCTAAGCACCCGCTCCAGTTCCGCAGCGCGGTCGCGGGT > 5:55732/1‑148 CCCAGGGCTAAGCACCCGCTCCAGTTCCGCAGCGCGGTCGCGGGTGCTTAGCCCTGGGCAGTAGCGCCTGTTCAGGCATGATTGGCCCACATTTGCAGGCGCGGGTTCAGCCGCGAACACCGGCTTTGCCGGTGTCATGCTCCGCGTGG > 2:164443/1‑149 CCGCTCCAGTTCCGCAGCGCGGTCGCGGGTGCTTAGCCCTGGGCAGTAGCGCCTGTTCAGGCATGATTGGCCCACATTTGCAGGCGCGGGTTCAGCCGC > 3:29075/1‑99 CCGCTCCAGTTCCGCAGCGCGGTCGCGGGTGCTTAGCCCTGGGCAGTAGCGCCTGTTCAGGCATGATTGGCCCACATTTGCAGGCGCGGGTTCAGCCGC < 4:29075/99‑1 ACCCGCGAAGAAGGCCACGCGGAGCATGACACCGGCAAAGCCGGTGTTCGCGGCTGAACCCGCGCCTGCAAATGTGGGCCAATCATGCCTGAACAGGCGCTACTGCCCAGGGCTAAGCACCCGCTCCAGTTCCGCAGCGCGGTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/960241‑960092‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtGCTTAGCCCTGGGCAGTAGCGCCTGTTCAGGCATGATTGGCCCACATTTGCAGGCGCGGGTTCAGCCGCGAACACCGGCTTTGCCGGTGTCATGCTCCGCGTGG > NC_002947/960124‑960227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |