New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 982600	34 (0.810)	4 (0.100)	4/246	NT	11.2%	coding (1477/1863 nt)	hscA	DnaK‑like molecular chaperone
	?	NC_002947	= 982652	31 (0.770)					coding (1529/1863 nt)	hscA	DnaK‑like molecular chaperone

GCGAGCTGATCAGTGACTGCCGTTCGCTGGCCCGCTTCGA‑GCTGCGCGGCATCCCGGCCATGGTTGCCGGTGCTGCAAAAATCCGCGTCACCTTCCAGGTGGATGCCGATGGCCTGCTCAGCGTCGCTGCCCGCGAGCTGGGTTCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/982451‑982600 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCACGCCCGAACCCAGCTCGCGGGCAGCGACGCTGAGCAGGCCATCGGCATCCACCTGGAAGGTGACGCGGATTTTTGCAGCACCGGCAACCATGGCCG  <  NC_002947/982652‑982505                                                                                                                                                                                                                                                                                                             GCGAGCTGATCAGTGACTGCCGTTCGCTGGCCCGCTTCGA‑GCTGCGCGGCATCCCGGCCATGGTTGCCGGTGCTGCAAAAATCCGCGTCACCTTCCAGGTGGATGCCGATGGCCTGCTCAGCGTCGCTGCCCACGAGCTGGGTTCGGGC                                                                                                                                                       <  6:136792/149‑1                ACTGCCGTTCGCTGGCCCGCTTCGAGGCTGCGCGGCATCCCGGCCATGGTTGCCGGTGCTGCAAAAATCCGCGTCACCTTCCAGGTGGATGCCGATGGCCTGCTCAGCGTCGCTGCCCGCGAGCTGGGTTCGGGCGATTTCGCCGTCGG                                                                                                                                         >  1:3334/1‑149                                                       CCGGCCATGGTTGCCGGTGCTGCAAAAATCCGCGTCACCTTCCAGGTGGATGCCGATGGCCTGCTCAGCGTCGCTGCCCGCGAGCTGGGTTCGGGCGATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCA                                                                                                  >  6:248971/1‑149                                                           CCATGGTTGCCGGTGCTGCAAAAATCCGCGTCACCTTCCAGGTGGATGCCGATGGCCTGCTCAGCGTCGCTGCCCGCGAGCTGGGTTCGGGCGATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCACGCC                                                                                              <  2:3334/149‑1                                                                 TTGCCGGTGCTGCAAAAATCCGCGTCACCTTCCAGGTGGATGCCGATGGCCTGCTCAGCGTCGCTGCCCGCGAGCTGGGTTCGGGCGATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCACGCCCGAACC                                                                                        <  5:248971/149‑1                                                                                                                                                   GGGCGATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCACGCCCGAACCCAGCTCGCGGGCAGCGACGCTGAGCAGGCCATCGGCATCCACCTGGAAGGTGACGCGGATTTTTGCAGCACCGGCAACCATG      >  6:258143/1‑149                                                                                                                                                     GCGATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCACGCCCGAACCCAGCTCGCGGGCAGCGACGCTGAGCAGGCCATCGGCATCCACCTGGAAGGTGACGCGGATTTTTGCAGCACCGGCAACCATGGC    >  4:72941/1‑149                                                                                                                                                      CGATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCACGCCCGAACCCAGCTCGCGGGCAGCGACGCTGAGCAGGCCATCGGCATCCACC                                             <  7:57415/107‑1                                                                                                                                                      CGATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCACGCCCGAACCCAGCTCGCGGGCAGCGACGCTGAGCAGGCCATCGGCATCCACC                                             >  8:57415/1‑107                                                                                                                                                       GATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCACGCCCGAACCCAGCTCGCGGGCAGCGACGCTGAGCAGGCCATCGGCATCCACCTGGAAGGTGACGCGGATTTTTGCAGCACCGGCAACCATGGCCG  >  2:122354/1‑149                                                                                                                                                                                                                                                                                                             GCGAGCTGATCAGTGACTGCCGTTCGCTGGCCCGCTTCGA‑GCTGCGCGGCATCCCGGCCATGGTTGCCGGTGCTGCAAAAATCCGCGTCACCTTCCAGGTGGATGCCGATGGCCTGCTCAGCGTCGCTGCCCGCGAGCTGGGTTCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/982451‑982600 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgATTTCGCCGTCGGTCAGGCCGTAGGACGGCTTGACCTGAATGCTGGCTTCCACGCCCGAACCCAGCTCGCGGGCAGCGACGCTGAGCAGGCCATCGGCATCCACCTGGAAGGTGACGCGGATTTTTGCAGCACCGGCAACCATGGCCG  <  NC_002947/982652‑982505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.