New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1090134 | 38 (0.900) | 6 (0.150) | 4/242 | NT | 15.1% | coding (995/1380 nt) | fumC‑I | class 2 fumarate hydratase |
? | NC_002947 | = 1090156 | 32 (0.810) | coding (1017/1380 nt) | fumC‑I | class 2 fumarate hydratase |
TGGCGTTGATGAAAATCGCCAACGATCTGCGCTGGATGAACTCCGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1089981‑1090134 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggtcgcGTCGTTGCCAATCACTTGGGCGGCGACCATGGCAGTGGCCTCCGGGATCACCGGGTTGACCTTGCCTGGCATGATCGAAGAGCCCGGCTGCAGAGCTTGCAGCTCGATTTCGCCCAGACCGGCCAGCGGGCCGGAGTTCATCCAGCG < NC_002947/1090156‑1090010 TGGCGTTGATGAAAATCGCCAACGATCTGCGCTGGATGAACTCCGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATG < 3:238170/149‑1 CCAACGATCTGCGCTGGATGAACTCCGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCGTCGTTGCCAAT > 1:102479/1‑148 AACTCCGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCGTCGTTGCCAATCACTTGGGCGGCGACCATGG < 2:102479/148‑1 CGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCGTCGTTGCCAATCACTTGGGCGGCGACCATGG < 5:95010/143‑1 CGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCGTCGTTGCCAATCACTTGGGCGGCGACCATGG > 6:95010/1‑143 CGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCGTCGTTGCCAATCACTTGGGCGGCGACCATcg > 5:63246/1‑129 CGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGCGTCGTTGCCAATCACTTGGGCGGCGACCATGG < 6:63246/131‑1 GGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCG > 5:154955/1‑91 GGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCG < 6:154955/91‑1 TGGTCGCGTCGTTGCCAATCACTTGGGCGGCGACCATGGCAGTGGCCTCCGGGATCACCGGGTTGACCTTGCCTGGCATGATCGAAGAGCCCGGCTGCAGAGCTTGCAGCTCGATTTCGCCCAGACCGGCCAGCGGGCCGGAGTTCATC < 3:27636/149‑1 GTCGCGTCGTTGCCAATCACTTGGGCGGCGACCATGGCAGTGGCCTCCGGGATCACCGGGTTGACCTTGCCTGGCATGATCGAAGAGCCCGGCTGCAGAGCTTGCAGCTCGATTTCGCCCAGACCGGCCAGCGGGCCGGAGTTCATCC < 5:222812/148‑1 GCGTCGTTGCCAATCACTTGGGCGGCGACCATGGCAGTGGCCTCCGGGATCACCGGGTTGACCTTGCCTGGCATGATCGAAGAGCCCGGCTGCAGAGCTTGCAGCTCGATTTCGCCCAGACCGGCCAGCGGGCCGGAGTTCATCCAGCG > 1:105803/1‑149 TGGCGTTGATGAAAATCGCCAACGATCTGCGCTGGATGAACTCCGGCCCGCTGGCCGGTCTGGGCGAAATCGAGCTGCAAGCTCTGCAGCCGGGCTCTTCGATCATGCCAGGCAAGGTCAACCCGGTGATCCCGGAGGCCACTGCCATGGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1089981‑1090134 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggtcgcGTCGTTGCCAATCACTTGGGCGGCGACCATGGCAGTGGCCTCCGGGATCACCGGGTTGACCTTGCCTGGCATGATCGAAGAGCCCGGCTGCAGAGCTTGCAGCTCGATTTCGCCCAGACCGGCCAGCGGGCCGGAGTTCATCCAGCG < NC_002947/1090156‑1090010 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |