New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1181592 = | 42 (0.990) | 5 (0.120) | 5/248 | NT | 10.8% | coding (645/1407 nt) | cumA | multicopper oxidase |
? | NC_002947 | 1181631 = | 42 (1.040) | coding (684/1407 nt) | cumA | multicopper oxidase |
GGGGTCACCGGGTTGCCGTCGAGGGCATAGATTCTCGCCTCGCAGTTGCCCTTGAGGTTGAGGCGGTAGGTCCAGGTATTGTCCAGGTTCAGCAGGCGCACCCGCACCACCTGGCCGGCCGGCAGCTCGGTGATCGAGTCGGCCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1181741‑1181592 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGGTGGTGCGGGTGCGCCTGCTGAACCTGGACAATACCTGGACCTACCGCCTCAACCTCAAGGGCAACTGCGAGGCGAGAATCTATGCCCTCGACGGCAACCCGGTGACCCCGCGTGCGCTGGA > NC_002947/1181631‑1181753 GGGGTCACCGGGTTGCCGTCGAGGGCATAGATTATCGCATCGCAGTTGCCCTTGAGGTTGAGGCGGTAGGTCCAGGTATTGTCCAGGTTCAGCAGGCGAACACGCACCACCTGGCCGGACGGAAGCTCGGTGATCGAGTCGGCCTGGC > 6:123992/1‑148 CTGGCCGGCCGGCAGCTCGGTGATCGAGTCGGCCTGGCCAGGTGGTGCGGGTGCGCCTGCTGAACCTGGACAATACCTGGACCTACCGCCTCAACCTCAAGGGCAACTGCGAGGCGAGAATCTATGCCCTCGACGGCAACCCGGTGACC > 8:132029/1‑149 CCGGCCGGCAGCTCGGTGATCGAGTCGGCCTGGCCAGGTGGTGCGGGTGCGCCTGCTGAACCTGGACAATACCTGGACCTACCGCCTCAACCTCAAGGGCAACTGCGAGGCGAGAATCTATGCCCTCGACG > 7:83570/1‑131 CCGGCCGGCAGCTCGGTGATCGAGTCGGCCTGGCCAGGTGGTGCGGGTGCGCCTGCTGAACCTGGACAATACCTGGACCTACCGCCTCAACCTCAAGGGCAACTGCGAGGCGAGAATCTATGCCCTCGACG < 8:83570/131‑1 CGGCCGGCAGCTCGGTGATCGAGTCGGCCTGGCCAGGTGGTGCGGGTGCGCCTGCTGAACCTGGACAATACCTGGACCTACCGCCTCAACCTCAAGGGCAACTGCGAGGCGAGAATCTATGCCCTCGACGGCAACCCGGTGACCCCGCG > 6:165877/1‑149 GCTCGGTGATCGAGTCGGCCTGGCCAGGTGGTGCGGGTGCGCCTGCTGAACCTGGACAATACCTGGACCTACCGCCTCAACCTCAAGGGCAACTGCGAGGCGAGAATCTATGCCCTCGACGGCAACCCGGTGACCCCGCGTGCGCTGGA < 7:132029/149‑1 GGGGTCACCGGGTTGCCGTCGAGGGCATAGATTCTCGCCTCGCAGTTGCCCTTGAGGTTGAGGCGGTAGGTCCAGGTATTGTCCAGGTTCAGCAGGCGCACCCGCACCACCTGGCCGGCCGGCAGCTCGGTGATCGAGTCGGCCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1181741‑1181592 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGGTGGTGCGGGTGCGCCTGCTGAACCTGGACAATACCTGGACCTACCGCCTCAACCTCAAGGGCAACTGCGAGGCGAGAATCTATGCCCTCGACGGCAACCCGGTGACCCCGCGTGCGCTGGA > NC_002947/1181631‑1181753 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |