New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1218645 | 43 (1.020) | 4 (0.100) | 3/246 | NT | 8.9% | coding (182/1137 nt) | PP_1064 | alpha/beta family hydrolase |
? | NC_002947 | = 1218666 | 41 (1.020) | coding (203/1137 nt) | PP_1064 | alpha/beta family hydrolase |
GTCGCACCGCCTGGCGGGAGTCATAAAACTGTCACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTCTGTTCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1218493‑1218645 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcTGTTCGGCGAAACTCGCCGGTGCGCTGAACA‑GAAAGAAAAGAAAAAGCCAAAAAGCCCGCATGAAAGAAACACCAGAATGCAGATCCCCAGTAGAGCGCGAGTCTGATGAATTCTGTTCGGGCGCGCTGCCACAGTTCGGTGA < NC_002947/1218666‑1218524 GTCGCACCGCCTGGCGGGAGTCATAAAACTGTCACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTCTGTTC < 3:158062/148‑1 CCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTCTGTTCAGCGCTGTTCGGCGAAACTCGCCGGTGCGCTGAAC < 3:1136/149‑1 CCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTCTGTTCAGCGCTGTTCGGCGAAACTCGCCGGTGCGCTGAAC < 5:216008/149‑1 ACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTCTGTTCAGCGCTGTTCGGCGAAACTCGCCGGTGCGCTGAACA < 1:175199/127‑1 ACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTCTGTTCAGCGCTGTTCGGCGAAACTCGCCGGTGCGCTGAACA > 2:175199/1‑127 AGCGCTGTTCGGCGAAACTCGCCGGTGCGCTGAACAGGAAAGAAAAGAAAAAGCCAAAAAGCCCGCATGAAAGAAACACCAGAATGCAGATCCCCAGTAGAGCGCGAGTCTGATGAATTCTGTTCGGGCGCGCTGCCACAGTTCGGTGA > 1:179814/1‑149 GCTGTTCGGCGAAACTCGCCGGTGCGCTGAACA‑GAAAGAAAAGAAAAAGCCAAAAAGCCCGCATGAAAGAAACACCAGAATGCAGATCCCCAGTAGAGCGCGAGTCTGATGAATTCTGTTCGG > 3:10732/1‑123 GCTGTTCGGCGAAACTCGCCGGTGCGCTGAACA‑GAAAGAAAAGAAAAAGCCAAAAAGCCCGCATGAAAGAAACACCAGAATGCAGATCCCCAGTAGAGCGCGAGTCTGATGAATTCTGTTCGG < 4:10732/123‑1 GTCGCACCGCCTGGCGGGAGTCATAAAACTGTCACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTCTGTTCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1218493‑1218645 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcTGTTCGGCGAAACTCGCCGGTGCGCTGAACA‑GAAAGAAAAGAAAAAGCCAAAAAGCCCGCATGAAAGAAACACCAGAATGCAGATCCCCAGTAGAGCGCGAGTCTGATGAATTCTGTTCGGGCGCGCTGCCACAGTTCGGTGA < NC_002947/1218666‑1218524 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |