New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1218645	43 (1.020)	4 (0.100)	3/246	NT	8.9%	coding (182/1137 nt)	PP_1064	alpha/beta family hydrolase
	?	NC_002947	= 1218666	41 (1.020)					coding (203/1137 nt)	PP_1064	alpha/beta family hydrolase

ATAAAACTGTCACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTCATGGGCTTGGGCGGACAGC  >  NC_002947/1218515‑1218788                                                                                                                                    |                                                                                                                                                 aTAAAACTGTCACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTCTCGC‑Cg                                                                                                                                >  1:180161/1‑148 (MQ=255)  tAAAACTGTCACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGaa                                                                                                                              >  5:100055/1‑149 (MQ=255)          tCACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTCCTGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAgcgct                                                                                                                       >  1:179814‑M2/1‑144 (MQ=255)           cACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTc                                                                                                                                     <  8:198023/134‑1 (MQ=255)           cACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTc                                                                                                                                     >  7:198023/1‑134 (MQ=255)            aCCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCtgtg                                                                                                                    >  8:111556/1‑149 (MQ=255)            aCCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCtgt                                                                                                                     <  2:138445/148‑1 (MQ=255)             ccGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCtgttcggcgaaactcgccggtgcgctgaac                                                                                                                    <  3:1136‑M1/149‑31 (MQ=255)             ccGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCtgttcggcgaaactcgccggtgcgctgaac                                                                                                                    <  5:216008‑M1/149‑31 (MQ=255)             ccGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGa                                                                                                                   >  3:151069/1‑149 (MQ=255)               gAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACg                                                                                                                 >  4:42143/1‑149 (MQ=255)                       gCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTg                                                                                                         >  7:22362/1‑149 (MQ=255)                        cAGCGCGCCAGAACAGAATTCCTCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGc                                                                                                        <  5:130117/149‑1 (MQ=255)                               cccGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCa                                                                                                 <  5:269741/149‑1 (MQ=255)                                ccGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAgc                                                                                                                          >  3:10732‑M2/1‑121 (MQ=255)                                ccGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAgc                                                                                                                          <  4:10732‑M2/123‑3 (MQ=255)                                    aCAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCtgttcggcgaaactcgccggtgcgctgaaca                                                                                                                   <  1:175199‑M1/127‑32 (MQ=255)                                    aCAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCtgttcggcgaaactcgccggtgcgctgaaca                                                                                                                   >  2:175199‑M1/1‑96 (MQ=255)                                     cAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGc                                                                                           <  3:42143/149‑1 (MQ=255)                                                     cgcgCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTc                                                                           <  4:151069/149‑1 (MQ=255)                                                      gcgcTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTc                                                                           <  8:22362/148‑1 (MQ=255)                                                       cgcTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAg                                                                         <  7:60322/149‑1 (MQ=255)                                                            tACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTgg                                                                    >  7:253869/1‑149 (MQ=255)                                                                ggggATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑GGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCt                                                                      >  4:111603/1‑143 (MQ=255)                                                                ggggATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCt                                                                      <  3:111603/143‑1 (MQ=255)                                                                 gggATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTAc                                                               >  7:54838/1‑149 (MQ=255)                                                                        gCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCg                                                        >  4:62663/1‑149 (MQ=255)                                                                          aTTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTg                                                                     <  8:182765/134‑1 (MQ=255)                                                                           ttCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCg                                                     <  5:37385/149‑1 (MQ=255)                                                                             cTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCgg                                                    <  8:253869/148‑1 (MQ=255)                                                                               ggTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCg                                                                                                      >  4:22515/1‑96 (MQ=255)                                                                               ggTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCg                                                                                                      <  3:22515/96‑1 (MQ=255)                                                                               ggTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTg                                                                                                   <  8:224545/99‑1 (MQ=255)                                                                               ggTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTg                                                                                                   >  7:224545/1‑99 (MQ=255)                                                                                       tttcATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCAcgcg                                         >  4:134087/1‑149 (MQ=255)                                                                                           aTGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGAccc                                     <  6:100055/149‑1 (MQ=255)                                                                                                     tttggctttttCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTtgc                             <  8:54838/147‑1 (MQ=255)                                                                                                           tttttCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGt                      >  6:58005/1‑148 (MQ=255)                                                                                                             tttcttttctTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTc                     <  3:134087/147‑1 (MQ=255)                                                                                                              ttcttttcttTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCAc                                            <  3:186375/123‑1 (MQ=255)                                                                                                              ttcttttcttTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCAc                                            >  4:186375/1‑123 (MQ=255)                                                                                                                      tttc‑tGTTCAGCGCACCGGCGAGTTTCGCACGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGAcc                                      >  1:157982/1‑122 (MQ=255)                                                                                                                      tttc‑tGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGAcc                                      <  2:157982/121‑1 (MQ=255)                                                                                                                       ttc‑tGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTCATGGGCTTggg          >  5:88855/1‑148 (MQ=255)                                                                                                                       ttc‑tGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTCATGGGCTTggg          <  6:88855/148‑1 (MQ=255)                                                                                                                        tc‑tGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTCATgg                 <  7:178251/140‑1 (MQ=255)                                                                                                                        tc‑tGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTCATgg                 >  8:178251/1‑140 (MQ=255)                                                                                                                           tGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAgcgctgaacagaaagaaaagaaaaagccaaaaagcccgcatgaaagaaacaccagaatgcagatccccagtagagcgcgagtctgatgaattctgt                            >  2:175199‑M2/1‑31 (MQ=255)                                                                                                                           tGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAgcgctgaacagaaagaaaagaaaaagccaaaaagcccgcatgaaagaaacaccagaatgcagatccccagtagagcgcgagtctgatgaattctgt                            <  1:175199‑M2/127‑97 (MQ=255)                                                                                                                            gTTCAGCGCACCGGCGAGTTTCGC‑CGAACAgcgctgaacagaaagaaaagaaaaagccaaaaagcccgcatgaaagaaacaccagaatgcagatccccagtagagcgcgagtctgatgaattctgttcgggcgcgctgccacagttcgg     <  5:216008‑M2/149‑120 (MQ=255)                                                                                                                            gTTCAGCGCACCGGCGAGTTTCGC‑CGAACAgcgctgaacagaaagaaaagaaaaagccaaaaagcccgcatgaaagaaacaccagaatgcagatccccagtagagcgcgagtctgatgaattctgttcgggcgcgctgccacagttcgg     <  3:1136‑M2/149‑120 (MQ=255)                                                                                                                            gTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTCATGGGCTTGGGCGGAc     >  5:271404/1‑149 (MQ=255)                                                                                                                             ttCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTtgc                             >  5:203297/1‑124 (MQ=255)                                                                                                                             ttCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTtgc                             <  6:203297/124‑1 (MQ=255)                                                                                                                                aGCGCtgttcggcgaaactcgccggtgcgctgaacaggaaagaaaagaaaaagccaaaaagcccgcatgaaagaaacaccagaatgcagatccccagtagagcgcgagtctgatgaattctgttcgggcgcgctgccacagttcggtga  >  1:179814‑M1/1‑5 (MQ=255)                                                                                                                                aGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTCATGGGCTTGGGc         <  6:83256/141‑1 (MQ=255)                                                                                                                                aGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTCATGGGCTTGGGc         >  5:83256/1‑141 (MQ=255)                                                                                                                                   gctgttcggcgaaactcgccggtgcgctgaacagaaagaaaagaaaaagccaaaaagcccgcatgaaagaaacaccagaatgcagatccccagtagagcgcgagtctgatgaattctgttcgg                         >  3:10732‑M1/1‑2 (MQ=255)                                                                                                                                   gctgttcggcgaaactcgccggtgcgctgaacagaaagaaaagaaaaagccaaaaagcccgcatgaaagaaacaccagaatgcagatccccagtagagcgcgagtctgatgaattctgttcgg                         <  4:10732‑M1/123‑122 (MQ=255)                                                                                                                                    |                                                                                                                                                 ATAAAACTGTCACCGAACTGTGGCAGCGCGCCCGAACAGAATTCATCAGACTCGCGCTCTACTGGGGATCTGCATTCTGGTGTTTCTTTCATGCGGGCTTTTTGGCTTTTTCTTTTCTTTC‑TGTTCAGCGCACCGGCGAGTTTCGC‑CGAACAGCGCTGTGACGCCCAGGTGCCGGTGCAGCGTGCCGAACTCGGTGCCGTCAGCCTGGTGTACCAGAGCGTCGGTGCGCCACGCGACCCGGCCTTGCTGCTGGTCATGGGCTTGGGCGGACAGC  >  NC_002947/1218515‑1218788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.