| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1472511 = | 53 (1.260) | 3 (0.070) | 3/246 | NT | 6.7% | coding (316/1491 nt) | alg8 | glycosyltransferase Alg8 |
| ? | NC_002947 | 1472544 = | 33 (0.820) | coding (283/1491 nt) | alg8 | glycosyltransferase Alg8 | |||||
CTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1472662‑1472511‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccaTCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCA > NC_002947/1472544‑1472690 CTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTGA < 4:162029/149‑1 CCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTGAC > 4:46782/1‑148 GATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTG < 6:230132/115‑1 CTGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCATCAGGTAGACATGTGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGTGTG < 5:86015/144‑1 CTGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCATCAGGTAGACATGTGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTG > 6:86015/1‑144 TGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCC > 7:25795/1‑148 CCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGC < 6:20444/135‑1 CATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCA < 6:60721/149‑1 CTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1472662‑1472511‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccaTCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCA > NC_002947/1472544‑1472690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |