New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1472511 = | 53 (1.260) | 3 (0.070) | 3/246 | NT | 6.7% | coding (316/1491 nt) | alg8 | glycosyltransferase Alg8 |
? | NC_002947 | 1472544 = | 33 (0.820) | coding (283/1491 nt) | alg8 | glycosyltransferase Alg8 |
CTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1472662‑1472511 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccaTCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCA > NC_002947/1472544‑1472690 CTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTGA < 4:162029/149‑1 CCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTGAC > 4:46782/1‑148 GATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTG < 6:230132/115‑1 CTGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCATCAGGTAGACATGTGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGTGTG < 5:86015/144‑1 CTGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCATCAGGTAGACATGTGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTG > 6:86015/1‑144 TGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCC > 7:25795/1‑148 CCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGC < 6:20444/135‑1 CATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCA < 6:60721/149‑1 CTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTAATGCCACCGACCCGTCGCATGTCTACCTGATGGTCACCAGCTTCCGTATCGAAGCGCTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1472662‑1472511 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccaTCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCA > NC_002947/1472544‑1472690 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |