New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1522319 =	42 (0.990)	3 (0.070)	3/246	NT	7.2%	coding (227/1215 nt)	ftsW	lipid II flippase
	?	NC_002947	1522355 =	37 (0.920)					coding (263/1215 nt)	ftsW	lipid II flippase

CACGTTGAAGAAGCTGAAACCGATCCAGCGCATGGAGCCGTTGACCTCACGGCCGATACCCGGCACCAGCACCAGTACCAGCAAGCCGAAAGCGCCAAGCAGCATCATGAAGCCCATGCGCTGCCAGGTGGCGATCGGCACCAGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1522467‑1522319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggGCTTCATGATGCTGCTTGGCGCTTTCGGCTTGCTGGTACTGGTGCTGGTGCCGGGTATCGGCCGTGAGGTCAACGGCTCCATGCGCTGGATCGGTTTCAGCTTCTT  >  NC_002947/1522355‑1522460                                                                                                                                                                                                                                                                 CACGTTGAAGAAGCTGAAACCGATCCAGCGCATGGAGCCGTTGACCTCACGGCCGATACCCGGCACCAGCACCAGTACCAGCAAGCCGAAAGCGCCAAGCAGCATCATGAAGCCCATGCGCTGCCAGGTGGCGATCGGCACCAGCATG                                                                                                             <  2:65655/148‑1                                               TCACGGCCGATACCCGGCACCAGCACCAGTACCAGCAAGCCGAAAGCGCCAAGCAGCATCATGAAGCCCATGCGCTGCCAGGTGGCGATCGGCACCAGCATG                                                                                                             >  6:109177/1‑102                                                                                                            TGAAGCCCATGCGCTGCCAGGTGGCGATCGGCACCAGCATGGGCTTCATGATGCTGCTTGGCGCTTTCGGCTTGCTGGTACTGGTGCTGGTGCCGGGTATCGGCCGTGAGGTCAACGGCTCCATGCGCTGGATCGGTTTCAGCTTCTT  >  3:106139/1‑148                                                                                                                   CATGCGCTGCCAGGTGGCGATCGGCACCAGCATGGGCTTCATGATGCTGCTTGGCGCTTTC                                                                                  >  7:88102/1‑61                                                                                                                   CATGCGCTGCCAGGTGGCGATCGGCACCAGCATGGGCTTCATGATGCTGCTTGGCGCTTTC                                                                                  <  8:88102/61‑1                                                                                                                                                                                                                                                                 CACGTTGAAGAAGCTGAAACCGATCCAGCGCATGGAGCCGTTGACCTCACGGCCGATACCCGGCACCAGCACCAGTACCAGCAAGCCGAAAGCGCCAAGCAGCATCATGAAGCCCATGCGCTGCCAGGTGGCGATCGGCACCAGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1522467‑1522319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggGCTTCATGATGCTGCTTGGCGCTTTCGGCTTGCTGGTACTGGTGCTGGTGCCGGGTATCGGCCGTGAGGTCAACGGCTCCATGCGCTGGATCGGTTTCAGCTTCTT  >  NC_002947/1522355‑1522460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.