New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1588596 =	35 (0.830)	3 (0.080)	3/242	NT	8.5%	coding (503/876 nt)	PP_1393	transcriptional regulator
	?	NC_002947	1588641 =	32 (0.810)					coding (458/876 nt)	PP_1393	transcriptional regulator

CCCGGACGTACCGGTGGAGCTGACCACGACCGTGCAGCACGGGGTGGATTTGCGGCGCGAGGGCTTCGATGCGGCAGTGGTCTACGGCGATGCACCGAACCACGGGCTGCAGGTGCGCAAGCTGTTCGATGAGCAGCTGACCCCTGTGTGCGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1588751‑1588596 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcaccTGCAGCCCGTGGTTCGGTGCATCGCCGTAGACCACTGCCGCATCGAAGCCCTCGCGCCGCAAATCCACCCCGTGCTGCACGGTCGTGGTCAGCTCCACCGGTACGTCCGGGCGCAGTGCCTGCCACTCCATCAGACGCGGCAGCAGC  >  NC_002947/1588641‑1588787                                                                                                                                                                                                                                                                                                                 CCCGGACGTACCGGTGGAGCTGACCACGACCGTGCAGCACGGGGTGGATTTGCGGCGCGAGGGCTTCGATGCGGCAGTGGTCTACGGCGATGCACCGAACCACGGGCTGCAGGTGCGCAAGCTGTTCGATGAGCAGCTGACCCCTGTGT                                                                                                                                                            >  2:76175/1‑149  CCGGACGTACCGGTGGAGCTGACCACGACCGTGCAGCACGGGGTGGATTTGCGGCGCGAGGGCTTCGATGCGGCAGTGGTCTACGGCGATGCACCGAACCACGGGCTGCAGGTGCGCAAGCTGTTCGATGAGCAGCTGACCCCTGTGTG                                                                                                                                                           >  3:239269/1‑149   CGGACGTACCGGTGGAGCTGCCCACGACCGTGCAGCACGGGGTGGATTTGCGGCGCGAGGGCTTCGCTGCGGCAGTGGTCTACGGCGATGCACCGAACCACGGGCTGCAGGTGCGCAAGCTGTTCGATGAGCAGCTGACCCCTGTGTGC                                                                                                                                                          >  6:22877/1‑149                                                                                                            TGCAGGTGCGCAAGCTGTTCGATGAGCAGCTGACCCCTGTGTGCGCACCTGCAGCCCGTGGTTCGGTGCATCGCCGTAGACCACTGCCGCATCGAAGCCCTCGCGCCGCAAATCCACCCCGTGCTGCACGGTCGTGGTCAGCTCCACCG                                                 >  8:204483/1‑149                                                                                                                 GTGCGCAAGCTGTTCGATGAGCAGCTGACCCCTGTGTGCGCACCTGCAGCCCGTGGTTCGGTGCATCGCCGTAGACCACTGCCGCATCGAAGCCCTCGCGCCGCAAATCCACCCCGTGCTGCACGGTCGTGGTCAGCTCCACCGGTACG                                            >  7:87466/1‑149                                                                                                                    CGCAAGCTGTTCGATGAGCAGCTGACCCCTGTGTGCGCACCTGCAGCCCGTGGTTCGGTGCATCGCCGTAGACCACTGCCGCATCGAAGCCCTCGCGCCGCAAATCCACCCCGTGCTGCACGGTCGTGGTCAGCTCCACCGGTACGTCC                                         <  8:87466/149‑1                                                                                                                                                           CCTGCAGCCCGTGGTTCGGTGCATCGCCGTAGACCACTGCCGCATCGAAGCCCTCGCGCCGCAAATCCACCCCGTGCTGCACGGTCGTGGTCAGCTCCACCGGTACGTCCGGGCGCAGTGCCTGCCACTCCATCAGACGCGGCAGCAGC  <  4:174150/149‑1                                                                                                                                                                                                                                                                                                                 CCCGGACGTACCGGTGGAGCTGACCACGACCGTGCAGCACGGGGTGGATTTGCGGCGCGAGGGCTTCGATGCGGCAGTGGTCTACGGCGATGCACCGAACCACGGGCTGCAGGTGCGCAAGCTGTTCGATGAGCAGCTGACCCCTGTGTGCGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1588751‑1588596 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcaccTGCAGCCCGTGGTTCGGTGCATCGCCGTAGACCACTGCCGCATCGAAGCCCTCGCGCCGCAAATCCACCCCGTGCTGCACGGTCGTGGTCAGCTCCACCGGTACGTCCGGGCGCAGTGCCTGCCACTCCATCAGACGCGGCAGCAGC  >  NC_002947/1588641‑1588787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.