| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1599905 = | 49 (1.160) | 5 (0.120) | 5/246 | NT | 10.4% | coding (1279/2292 nt) | bglX | beta‑D‑glucoside glucohydrolase |
| ? | NC_002947 | 1599952 = | 39 (0.970) | coding (1232/2292 nt) | bglX | beta‑D‑glucoside glucohydrolase | |||||
CCTGCACCGCGAAGCTGCGCGCGACGTGGCACGCCGCAGCCTGGTGCTGCTGGAAAACCGCAACCAGACCCTGCCGCTGAAAAAGGCCGGCACCATTGCCTTGGTCGGCCCGCTGGCCGATGCTCCGATCGACATGATGGGCAGCTGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1600056‑1599905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccgACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGCAGCTTCGCGGTGCAGGCGGTCGTTGCCGTAGTAGTCCTTCAGATCGGTTTCGGCCTTG > NC_002947/1599952‑1600098 CCTGCACCGCGAAGCTGCGCGCGACGTGGCACGCCGCAGCCTGGTGCTGCTGGAAAACCGCAACCAGACCCTGCCGCTGAAAAAGGCCGGCACCATTGCCTTGGTCGGCCCGCTGGCCGATGCTCCGATCGACATGATGGGCAGCTGGG > 5:70245/1‑149 GGTCGGCCCGCTGGCCGATGCTCCGATCGACATGATGGGCAGCTGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGC > 1:243956/1‑139 GGTCGGCCCGCTGGCCGATGCTCCGATCGACATGATGGGCAGCTGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGC < 2:243956/139‑1 GTCGGCCCGCTGGCCGATGCTCCGATCGACATGATGGGCAGCTGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGCAGCTTCGCGGT > 5:243200/1‑149 CCCGCTGGCCGATGCTCCGATCGACATGATGGGCAGCTGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCAC < 5:170482/124‑1 CCCGCTGGCCGATGCTCCGATCGACATGATGGGCAGCTGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCAC > 6:170482/1‑124 CGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGCAGCTTCGCGGTGCAGGCGGTCGTTGCCGTAGTAGTCCTTCAGATCGGTTTCGGCCTTG < 7:49513/149‑1 CCTGCACCGCGAAGCTGCGCGCGACGTGGCACGCCGCAGCCTGGTGCTGCTGGAAAACCGCAACCAGACCCTGCCGCTGAAAAAGGCCGGCACCATTGCCTTGGTCGGCCCGCTGGCCGATGCTCCGATCGACATGATGGGCAGCTGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1600056‑1599905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccgACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGCAGCTTCGCGGTGCAGGCGGTCGTTGCCGTAGTAGTCCTTCAGATCGGTTTCGGCCTTG > NC_002947/1599952‑1600098 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |