New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1599905 =	49 (1.160)	5 (0.120)	5/246	NT	10.4%	coding (1279/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase
	?	NC_002947	1599952 =	39 (0.970)					coding (1232/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase

CATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGCAGCTTCG  >  NC_002947/1599758‑1600047                                                                                                                                                    |                                                                                                                                               caaggccgaaaccgatctgaaggactactacggcaacgaccgcctgcaccgcgaagctgcgcgcgacgtggcacgccgcagcctggtgctgctggaaaaccgcaaccagaccctgccgctgaaaaaggccggcaccattgccttggtCg                                                                                                                                               <  7:49513‑M1/2‑1 (MQ=255)            aGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTAGGCGGCCCAGCTGcc                                                                                                                                    >  6:49581/1‑149 (MQ=255)             ggAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGccc                                                                                                                                           >  1:244563/1‑141 (MQ=255)             ggAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGccc                                                                                                                                           <  2:244563/141‑1 (MQ=255)              gAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCGCCGCTGcgc                                                                                                                                   >  6:43676/1‑146 (MQ=255)                    cAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGt                                                                                                                            >  7:55443/1‑149 (MQ=255)                      ggTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTc                                                                                                                           >  8:58274/1‑148 (MQ=255)                       gTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGa                                                                                                                         >  6:117372/1‑149 (MQ=255)                       gTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGa                                                                                                                         >  5:224386/1‑149 (MQ=255)                          aTCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCg                                                                                                                      <  7:58274/149‑1 (MQ=255)                           tCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCgg                                                                                                                     <  4:61442/149‑1 (MQ=255)                                         gTCGGCCGTGACGTTGGATCCTTTTGGGTAGAGCAGCTTGGCCTTGCCTTCCACGGCTCGTAGCAAGCCTTCGCGCACGGTCACTGAGTGGACGGGTTTACCGTCGGCTGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGc                                                                                                        <  5:211829/148‑1 (MQ=255)                                          tCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCg                                                                                                       <  2:72433/148‑1 (MQ=255)                                            gCCCGTGACGTTGGAGCCTTTGGCGTAGACTAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGc                                                                                                    <  7:56265/149‑1 (MQ=255)                                                accgcgaagctgcgcgcgacgtggcacgccgcagcctggtgctgctggaaaaccgcaaccagaccctgccgctgaaaaaggccggcaccattgccttggtCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGAc                                                                                                >  5:243200‑M1/101‑149 (MQ=255)                                                   aCGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCaa                                                                                             <  5:43676/149‑1 (MQ=255)                                                          aGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTAGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATg                                                                                      <  5:49581/149‑1 (MQ=255)                                                           gcgcgcgacgtggcacgccgcagcctggtgctgctggaaaaccgcaaccagaccctgccgctgaaaaaggccggcaccattgccttggtCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGAcc                                                                                               >  1:243956‑M1/90‑139 (MQ=255)                                                           gcgcgcgacgtggcacgccgcagcctggtgctgctggaaaaccgcaaccagaccctgccgctgaaaaaggccggcaccattgccttggtCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGAcc                                                                                               <  2:243956‑M1/50‑1 (MQ=255)                                                           gCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATgg                                                                                     >  3:164065/1‑149 (MQ=255)                                                            ccTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCg                                                                                                                      >  3:185453/1‑115 (MQ=255)                                                            ccTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCg                                                                                                                      <  4:185453/115‑1 (MQ=255)                                                                 ggCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCg                                                                                <  4:164065/148‑1 (MQ=255)                                                                    gtggcacgccgcagcctggtgctgctggaaaaccgcaaccagaccctgccgctgaaaaaggccggcaccattgccttggtCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCggg                                                                                                     <  5:170482‑M1/44‑1 (MQ=255)                                                                    gtggcacgccgcagcctggtgctgctggaaaaccgcaaccagaccctgccgctgaaaaaggccggcaccattgccttggtCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCggg                                                                                                     >  6:170482‑M1/81‑124 (MQ=255)                                                                          cAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGcc                                                                                 <  3:34450/138‑1 (MQ=255)                                                                          cAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGcc                                                                                 >  4:34450/1‑138 (MQ=255)                                                                          cAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCa                                                                      <  5:109590/149‑1 (MQ=255)                                                                            gCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGACCTTTTTCAGc                                                                    <  6:224386/149‑1 (MQ=255)                                                                                  ccttgccttCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAgg                                                              >  8:52455/1‑149 (MQ=255)                                                                                  ccttgccttCCACGGCGCGGCGCAAGCCTTCGAGCACGGTCACCGACTCGACCGTAATACAGACGGCGTCCCACCAGCCCGTCATTTCGATCGGAAAATCTGGCAGACGGCAGACAAACTCAAAGCTGCCGGCATATTTAGGCGCCAgg                                                              >  6:205000/1‑149 (MQ=255)                                                                                         ttCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCttttt                                                                        <  1:72590/132‑1 (MQ=255)                                                                                             aCGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTGTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCg                                                   <  8:55443/149‑1 (MQ=255)                                                                                                     gcgcAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCca                                           >  3:50438/1‑149 (MQ=255)                                                                                                       gcAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCcag                                          >  3:94767/1‑148 (MQ=255)                                                                                                         aacccTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGGCCAAAATGTCGATAGGCGCAACGGCCACCCGGCCGACCAAGGGAATGGTGGCGGCCATTTTACGCGGCCCGGGCTGGTGGCCGTTTTCcagcag                                       >  4:16193/4‑149 (MQ=255)                                                                                                             cTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCcag                                          >  5:58860/1‑142 (MQ=255)                                                                                                             cTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCcag                                          <  6:58860/142‑1 (MQ=255)                                                                                                              ttCGCGCACGGTCACCGAGTGGACGGTTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCAc                                    <  7:111263/147‑1 (MQ=255)                                                                                                                  cgcACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAgg                                >  6:143446/1‑147 (MQ=255)                                                                                                                  cgcACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAgg                                <  5:143446/147‑1 (MQ=255)                                                                                                                         tCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGt                       <  5:117372/149‑1 (MQ=255)                                                                                                                          cACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTg                      <  7:52455/149‑1 (MQ=255)                                                                                                                            ccGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTgg                                                        <  6:97303/113‑1 (MQ=255)                                                                                                                            ccGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTgg                                                        >  5:97303/1‑113 (MQ=255)                                                                                                                            ccGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGcc                    >  6:98517/1‑149 (MQ=255)                                                                                                                                   gACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTc               <  4:118741/147‑1 (MQ=255)                                                                                                                                   gACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTc               >  3:118741/1‑147 (MQ=255)                                                                                                                                       ggTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGc                                                                                                    >  7:199988/1‑58 (MQ=255)                                                                                                                                       ggTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGc                                                                                                    <  8:199988/58‑1 (MQ=255)                                                                                                                                       ggTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCgcgcgc         <  4:50438/149‑1 (MQ=255)                                                                                                                                        gTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGCa        <  5:98517/149‑1 (MQ=255)                                                                                                                                             ccGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGGCTGGTTGGGGTTTTACAGCAGCCCCAGGCTGCGGCGTGCCACGTCGCGCGCAGCTTc   >  6:70245/1‑149 (MQ=255)                                                                                                                                             ccGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGATGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGCAGCTTc   >  2:36511/1‑149 (MQ=255)                                                                                                                                              cGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCCATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGCAGCTTcg  >  3:202385/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                               CATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAGCAGCACCAGGCTGCGGCGTGCCACGTCGCGCGCAGCTTCG  >  NC_002947/1599758‑1600047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.