| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1688514 = | 39 (0.920) | 3 (0.070) | 3/248 | NT | 7.2% | coding (1023/1032 nt) | ydcT | polyamine ABC transporter ATP‑binding protein |
| ? | NC_002947 | 1688577 = | 40 (0.990) | coding (960/1032 nt) | ydcT | polyamine ABC transporter ATP‑binding protein | |||||
GCTACGAACTGCAGCTGGACAACGGTCAACTGCTGGCAGTAAGCCAGGCCAATGACCGCTGGCAGAAGCAGATGCAGGCCTGGCAGCTCGGGCAACGCCTGCAGGCGCACTGGCCCCGCGAGGCCATGACGGTGCTGCAGGAAACCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1688662‑1688514‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTACCTCATG > NC_002947/1688577‑1688720 GCTACGAACTGCAGCTGGACAACGGTCAACTGCTGGCAGTAAGCCAGGCCAATGACCGCTGGCAGAAGCAGATGCAGGCCTGGCAGCTCGGGCAACGCCTGCAGGCGCACTGGCCCCGCGAGGCCATGACGGTGCTGCAGGAAACCGAG < 8:83294/149‑1 GGCAGCTCGGGCAACGCCTGCAGGCGCACTGGCCCCGCGAGGCCATGACGGTGCTGCAGGAAACCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGT < 1:95761/136‑1 GGCAGCTCGGGCAACGCCTGCAGGCGCACTGGCCCCGCGAGGCCATGACGGTGCTGCAGGAAACCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGT > 2:95761/1‑136 GCAGCTCGGGCAACGCCTGCAGGCGCACTGGCCCCGCGAGGCCATGACGGTGCTGCAGGAAACCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCG > 6:130737/1‑149 CCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTACCTCATG > 1:100759/1‑149 CCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTACCTCATG > 7:185830/1‑149 GCTACGAACTGCAGCTGGACAACGGTCAACTGCTGGCAGTAAGCCAGGCCAATGACCGCTGGCAGAAGCAGATGCAGGCCTGGCAGCTCGGGCAACGCCTGCAGGCGCACTGGCCCCGCGAGGCCATGACGGTGCTGCAGGAAACCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1688662‑1688514‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTACCTCATG > NC_002947/1688577‑1688720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |