New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1688514 =	39 (0.920)	3 (0.070)	3/248	NT	7.2%	coding (1023/1032 nt)	ydcT	polyamine ABC transporter ATP‑binding protein
	?	NC_002947	1688577 =	40 (0.990)					coding (960/1032 nt)	ydcT	polyamine ABC transporter ATP‑binding protein

GATCAACAGCAGTGCCAGGTACAGGTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTACCTCATGG  >  NC_002947/1688432‑1688721                                                                                                                                                   |                                                                                                                                                 gATCAACAGCAGTGCCAGGTACAGGTTGGGGCGCCGGTACAGCAGGGTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGc                                                                                                                                               <  5:98781/149‑1 (MQ=255) cgaactgcagctggacaacggtcaactgctggcagtaagccaggccaatgaccgctggcagaagcagatgcaggcctggcagCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGc                                                                                                                                               >  6:130737‑M1/83‑149 (MQ=255)   tCAACAGCAGTGCCAGGTACAGGTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGc                                                                                                                                               >  4:117372/1‑147 (MQ=255)        acctgTGCCAGGTACAGGTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCt                                                                                                                                        <  5:237507/145‑1 (MQ=255)             tGCCAGGTACAGGTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCt                                                                                                                                        >  6:237507/1‑144 (MQ=255)             tGCCAGGTACAGGTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATc                                                                                                                                   >  8:72759/1‑149 (MQ=255)               acaacggtcaactgctggcagtaagccaggccaatgaccgctggcagaagcagatgcaggcctggcagCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGcc                                                                                                                                              <  1:95761‑M1/68‑1 (MQ=255)               acaacggtcaactgctggcagtaagccaggccaatgaccgctggcagaagcagatgcaggcctggcagCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGcc                                                                                                                                              >  2:95761‑M1/69‑136 (MQ=255)                cAGGTACAGGTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGc                                                                                                                                >  5:108193/1‑149 (MQ=255)                   gTAGAGGTTGGGGCGCCGGTACTGCAGGTTGGTGATGGTGGGCAGTGTGCTCATGTCTGCGGCCCTCGGTTTCCAGCTGCAGCGTCATTGCCTCGCGGGG‑CCAGTTCGGGTGAAGGCGTTGCCCGTGCTGCCAGGCCTGCATCTGCtt                                                                                                                              <  8:54091/148‑1 (MQ=255)                    tACAGGTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCt                                                                                                                            <  5:63073/149‑1 (MQ=255)                         gTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGGCCCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAg                                                                                                                                            <  1:32160/129‑1 (MQ=255)                         gTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAg                                                                                                                                            >  2:32160/1‑128 (MQ=255)                          ttGGGGCGCCGGAACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGc                                                                                                                      <  3:207470/149‑1 (MQ=255)                                  ccGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTg                                                                                                              <  2:102624/149‑1 (MQ=255)                                              gTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTg                                                                                                              >  8:248626/1‑137 (MQ=255)                                              gTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTg                                                                                                              <  7:248626/137‑1 (MQ=255)                                               ttGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGACCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCACGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTAACTg                                                                                                 >  2:66924/1‑149 (MQ=255)                                                      gggTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCcagcag                                                                                          <  3:117372/149‑1 (MQ=255)                                                          gcgcAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGa                                                                                      >  5:246547/1‑149 (MQ=255)                                                           cgcAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGa                                                                                      <  6:108193/148‑1 (MQ=255)                                                                tgtgCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTg                                                                                <  7:72759/149‑1 (MQ=255)                                                                     tCATGTCTGCGTCCCTCGGTTTCCTGCTGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGGCTGGAGGCGTTGCACGTGCTGCCAGGCCTGCATCTGCTTATTCCATCGGTCATTTGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAg                                                                           <  1:66924/149‑1 (MQ=255)                                                                     tCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTc                                                                              >  8:146030/1‑146 (MQ=255)                                                                          tCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCa                                                                      <  3:238824/149‑1 (MQ=255)                                                                             gCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGtt                                                                   <  6:246547/149‑1 (MQ=255)                                                                               ggcagctcgggcaacgcctgcaggcgcactggccccgcgaggccatgacggtgctgcaggaaaccgagCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGt                                                                               >  2:95761‑M2/69‑136 (MQ=255)                                                                               ggcagctcgggcaacgcctgcaggcgcactggccccgcgaggccatgacggtgctgcaggaaaccgagCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGt                                                                               <  1:95761‑M2/68‑1 (MQ=255)                                                                                gcagctcgggcaacgcctgcaggcgcactggccccgcgaggccatgacggtgctgcaggaaaccgagCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCg                                                                 >  6:130737‑M2/68‑149 (MQ=255)                                                                                   CTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGc                                                             <  8:83294‑M1/149‑1 (MQ=255)                                                                                               cagcaCCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGc                                                 >  5:229653/1‑149 (MQ=255)                                                                                                agcaCCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCcagcag                                                                                          >  4:203153/1‑107 (MQ=255)                                                                                                agcaCCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCcagcag                                                                                          <  3:203153/107‑1 (MQ=255)                                                                                                  caCCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCt                                                                         >  5:233120/1‑122 (MQ=255)                                                                                                  caCCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCt                                                                         <  6:233120/122‑1 (MQ=255)                                                                                                  caCCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCtt                                              <  6:234447/149‑1 (MQ=255)                                                                                                   aCCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTg                                             <  3:148558/149‑1 (MQ=255)                                                                                                       tCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTa                                                               >  7:209223/1‑127 (MQ=255)                                                                                                       tCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTa                                                               <  8:209223/127‑1 (MQ=255)                                                                                                         aTGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTg                                       >  8:52598/1‑149 (MQ=255)                                                                                                            gCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGa                                     >  8:81311/1‑148 (MQ=255)                                                                                                              cTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTg                                                        <  4:167390/127‑1 (MQ=255)                                                                                                                        ccAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTgcagca                         >  2:141559/1‑149 (MQ=255)                                                                                                                           gTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCgg                                                           >  1:100303/1‑112 (MQ=255)                                                                                                                           gTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCgg                                                           <  2:100303/112‑1 (MQ=255)                                                                                                                                    cAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTGGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCAcgc                      >  1:220523/1‑140 (MQ=255)                                                                                                                                    cAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCAcgc                      <  2:220523/140‑1 (MQ=255)                                                                                                                                    cAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGAc               <  1:141559/147‑1 (MQ=255)                                                                                                                                        cGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTAc         <  7:83294/149‑1 (MQ=255)                                                                                                                                             cccGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAg                                                              <  4:77111/91‑1 (MQ=255)                                                                                                                                              ccgagCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTACCTCATg   >  7:185830‑M2/6‑149 (MQ=255)                                                                                                                                              ccgagCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTACCTCATg   >  1:100759‑M2/6‑149 (MQ=255)                                                                                                                                               cgcccTGCCAGGCCTGCATCTGCTTCGGCCAGCGGTCATTGGCCGGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGGGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTACCTCATgg  <  7:166287/145‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 GATCAACAGCAGTGCCAGGTACAGGTTGGGGCGCCGGTACAGCAGGTTGGACAGGGTGCGCAGTGTGCTCATGTCAGCGGCCCTCGGTTTCCTGCAGCACCGTCATGGCCTCGCGGGG‑CCAGTGCGCCTGCAGGCGTTGCCCGAGCTGCCAGGCCTGCATCTGCTTCTGCCAGCGGTCATTGGCCTGGCTTACTGCCAGCAGTTGACCGTTGTCCAGCTGCAGTTCGTAGCGGGTGGCGCTGCCTTGGTACTGGACATCGTGCAGCACGCCGCTGACCTGTACCTCATGG  >  NC_002947/1688432‑1688721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.