New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1923366 =	35 (0.830)	4 (0.100)	3/246	NT	9.8%	coding (674/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease
	?	NC_002947	1923403 =	40 (0.990)					coding (637/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease

TCGGCGCCAGCACCTGGCAGGCCGCACTGCTGGTGGTGCTGCCGAACCTGCGCCAGGGCCTGATGGTGGCAGTGCTGCTGTCGTTCTCGTTCCTGTTCGGCGAATTCGTGTTTGCCAACCTGCTGGTCGGCACCCGCTACGAGACCCTGCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1923519‑1923366 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggtTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGCCAGGTGCTG  >  NC_002947/1923403‑1923512                                                                                                                                                                                                                                                                          TCGGCGCCAGCACCTGGCAGGCCGCACTGCTGGTGGTGCTGCCGAACCTGCGCCAGGGCCTGATGGTGGCAGTGCTGCTGTCGTTCTCGTTCCTGTTCGGCGAATTCGTGTTTGCCAACCTGCTGGTCGGCACCCGCTACGAGACCCTG                                                                                                                     >  7:121674/1‑149    GCGCCAGCACCTGGCAGGCCGCACTGCTGGTGGTGCTGCCGAACCTGCGCCAGGGCCTGATGGTGGCAGTGCTGCTGTCGTTCTCGTTCCTGTTCGGCGAATTCGTGTTTGCCAACCTGCTGGTCGGCACCCGCTACGAGACCCTGCAG                                                                                                                  >  5:208114/1‑149    GCGCCAGCACCTGGCAGGCCGCACTGCTGGTGGTGCTGCCGAACCTGCGCCAGGGCCTGATGGTGGCAGTGCTGCTGTCGTTCTCGTTCCTGTTCGGCGAATTCGTGTTTGCCAACCTGCTGGTCGGCACCCGCTACGAGACCCTGCAG                                                                                                                  <  6:208114/149‑1      GCCAGCACCTGGCAGGCCGCACTGCTGGTGGTGCTGCCGAACCTGCGCCAGGGCCTGATGGTGGCAGTGCTGCTGTCGTTCTCGTTCCTGTTCGGCGAATTCGTGTTTGCCAACCTGCTGGTCGGCACCCGCTACGAGACCCTGCAGGT                                                                                                                <  3:257215/149‑1                                                                                                                   CCAACCTGCTGGTCGGCACCCGCTACGAGACCCTGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGCCAGGTGCT   >  2:174898/1‑149                                                                                                                    CAACCTGCTGGTCGGCACCCGCTACGAGACCCTGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGCCAGGTGCTG  >  8:230701/1‑149                                                                                                                    CAACCTGCTGGTCGGCACCCGCTACGAGACCCTGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCA                                  >  3:84548/1‑117                                                                                                                    CAACCTGCTGGTCGGCACCCGCTACGAGACCCTGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCA                                  <  4:84548/117‑1                                                                                                                                                                                                                                                                          TCGGCGCCAGCACCTGGCAGGCCGCACTGCTGGTGGTGCTGCCGAACCTGCGCCAGGGCCTGATGGTGGCAGTGCTGCTGTCGTTCTCGTTCCTGTTCGGCGAATTCGTGTTTGCCAACCTGCTGGTCGGCACCCGCTACGAGACCCTGCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1923519‑1923366 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggtTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGCCAGGTGCTG  >  NC_002947/1923403‑1923512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.