New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1923366 =	35 (0.830)	4 (0.100)	3/246	NT	9.8%	coding (674/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease
	?	NC_002947	1923403 =	40 (0.990)					coding (637/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease

TACGCTGACGAAGCTCATGTCAGGTCTTGTCCTTGTTCAGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGCCAGGTGCTGGC  >  NC_002947/1923226‑1923514                                                                                                                                             |                                                                                                                                                     tACGCTGACGAAGCTCATGTCGGGTCTTGTCCTTGTTCAGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGc                                                                                                                                                 <  2:156123/146‑1 (MQ=255) tACGCTGACGAAGCTCATGTCAGGTCTTGTCCTTGTTCAGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAgg                                                                                                                                              <  3:153876/149‑1 (MQ=255)              cTCATGTCAGGTCTTGTCCTTGTTCAGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCggg                                                                                                                                 >  3:6810/1‑149 (MQ=255)                             gTCCTTGTTCAGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGt                                                                                                                  >  7:151720/1‑149 (MQ=255)                               cagcacctggcaggccgcactgctggtggtgctgccgaacctgcgccagggcctgatggtggcagtgctgctgtcgttctcgttcctgttcggcgaattcgtgtttgccaACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTg                                                                                                                >  8:230701‑M1/111‑149 (MQ=255)                                cTTGTTCAGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTgg                                                                                                               <  4:6810/149‑1 (MQ=255)                                agcacctggcaggccgcactgctggtggtgctgccgaacctgcgccagggcctgatggtggcagtgctgctgtcgttctcgttcctgttcggcgaattcgtgtttgccaACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTgg                                                                                                               >  2:174898‑M1/110‑149 (MQ=255)                                       aGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAacac                                                                                                        <  2:233383/149‑1 (MQ=255)                                       aGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAacac                                                                                                        >  7:115804/1‑149 (MQ=255)                                       aGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAaca                                                                                                         <  8:151720/148‑1 (MQ=255)                                         gCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAac                                                                                                          <  8:95685/145‑1 (MQ=255)                                         gCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAac                                                                                                          >  7:95685/1‑145 (MQ=255)                                         gCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGa                                                                                                      <  6:195166/149‑1 (MQ=255)                                                       aGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAg                                                                                         >  4:91477/1‑148 (MQ=255)                                                         gTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACca                                                                                                                        >  1:1755/1‑115 (MQ=255)                                                         gTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACca                                                                                                                        <  2:1755/115‑1 (MQ=255)                                                               tgccgaacctgcgccagggcctgatggtggcagtgctgctgtcgttctcgttcctgttcggcgaattcgtgtttgccaACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTg                                                                                                                <  4:84548‑M1/39‑1 (MQ=255)                                                               tgccgaacctgcgccagggcctgatggtggcagtgctgctgtcgttctcgttcctgttcggcgaattcgtgtttgccaACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTg                                                                                                                >  3:84548‑M1/79‑117 (MQ=255)                                                                ccAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGgaacgagaa                                                                                <  8:115804/148‑1 (MQ=255)                                                                              aaGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGcc                                                                                               <  4:70710/119‑1 (MQ=255)                                                                              aaGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGcc                                                                                               >  3:70710/1‑119 (MQ=255)                                                                                         gACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGc                                                      >  7:59358/1‑149 (MQ=255)                                                                                             aGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTg                                                  >  8:121674/1‑149 (MQ=255)                                                                                                    tGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGTGTCTAGTAGCGGGTGCCGACcagc                                                                                                                      >  6:255767/1‑74 (MQ=255)                                                                                                    tGTTGAACTGGCCGCTGCTGTTGAGCATTTTGTTCAGGTACACCTGCAGGGTCTCGTAGCTGGTGCCGACcagc                                                                                                                      <  5:255767/74‑1 (MQ=255)                                                                                                      ttGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGtt                                         >  3:89479/1‑149 (MQ=255)                                                                                                      ttGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGtt                                         >  6:150585/1‑149 (MQ=255)                                                                                                      ttGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCAACAGGCCCTGGCGCAGGtt                                         >  6:176746/1‑149 (MQ=255)                                                                                                           gTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCgg                                      >  4:199294/1‑147 (MQ=255)                                                                                                              gCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGgcaggc                                 >  6:145068/1‑147 (MQ=255)                                                                                                              gCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGgcagca                                 >  4:192421/1‑149 (MQ=255)                                                                                                               ccGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGc                                                      <  7:16498/127‑1 (MQ=255)                                                                                                               ccGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGc                                                      >  8:16498/1‑127 (MQ=255)                                                                                                                      tgTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACcag                          >  8:16217/1‑148 (MQ=255)                                                                                                                      tgTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGACACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACcag                          >  7:172218/1‑148 (MQ=255)                                                                                                                                  tgttCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTg              <  4:89479/148‑1 (MQ=255)                                                                                                                                  tgttCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCAAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGc             >  3:86576/1‑149 (MQ=255)                                                                                                                                       aGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCa                                                         <  6:136345/100‑1 (MQ=255)                                                                                                                                       aGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCa                                                         >  5:136345/1‑100 (MQ=255)                                                                                                                                         gTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTc                                                                                                  <  2:11882/57‑1 (MQ=255)                                                                                                                                         gTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTc                                                                                                  >  1:11882/1‑57 (MQ=255)                                                                                                                                         gTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGCCAGGTGc      >  6:142471/1‑149 (MQ=255)                                                                                                                                            cacCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGCCAGGTGCTgg   >  3:125833/1‑149 (MQ=255)                                                                                                                                             ACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGCCAGGTGCTGgc  <  3:257215‑M1/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                     TACGCTGACGAAGCTCATGTCAGGTCTTGTCCTTGTTCAGGCGGTTGGCGACCCAGGTCAGTACCAGCACGAAGGCGAAGTAGGAGATGACCAGCGCGCTGTTGAAGTGGCCGCTGCTGTTGCGCATGTTGTTCAGGTACACCTGCAGGGTCTCGTAGCGGGTGCCGACCAGCAGGTTGGCAAACACGAATTCGCCGAACAGGAACGAGAACGACAGCAGCACTGCCACCATCAGGCCCTGGCGCAGGTTCGGCAGCACCACCAGCAGTGCGGCCTGCCAGGTGCTGGC  >  NC_002947/1923226‑1923514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.