New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2015610 = | 40 (0.950) | 4 (0.100) | 4/248 | NT | 10.5% | coding (783/888 nt) | PP_1795 | hypothetical protein |
? | NC_002947 | 2015652 = | 30 (0.740) | coding (741/888 nt) | PP_1795 | hypothetical protein |
AGATGATGCATGGCCCCACCGGCAACGAGCCGTTGGTGGCGCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2015656‑2015610 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcatCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCC > NC_002947/2015652‑2015798 AGATGATGCATGGCCCCACCGGCAACGAGCCGTTGGTGGCGCTGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATT < 7:44898/83‑1 AGATGATGCATGGCCCCACCGGCAACGAGCCGTTGGTGGCGCTGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATT > 8:44898/1‑83 GATGATGCATGGCCCCACCGGCAACGAGCCGTTGGTGGCGCTGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACG > 3:131727/1‑149 GGTGGCGCTGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCC < 4:131727/148‑1 ATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCC > 3:96408/1‑149 AGATGATGCATGGCCCCACCGGCAACGAGCCGTTGGTGGCGCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2015656‑2015610 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcatCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCC > NC_002947/2015652‑2015798 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |