New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2015610 =	40 (0.950)	4 (0.100)	4/248	NT	10.5%	coding (783/888 nt)	PP_1795	hypothetical protein
	?	NC_002947	2015652 =	30 (0.740)					coding (741/888 nt)	PP_1795	hypothetical protein

TCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCC  >  NC_002947/2015505‑2015798                                                                                                                                                    |                                                                                                                                                   tCAGGCCATCTGGCCCGCTGCAATAGTGTACTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGcatca                                                                                                                                                   >  2:184386/1‑149 (MQ=255)   cgtaggttttagcctggtagggccattgcgcaaacactatgaactgacaggcctggtggtgttcggcaatgccgagccacagcgcctggtcgccaatcagatgATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCatcatc                                                                                                                                                 >  3:131727‑M1/104‑149 (MQ=255)        aTCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGAtt                                                                                                                                            <  6:58997/149‑1 (MQ=255)                           tgtTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGc                                                                                                                         >  3:25205/1‑149 (MQ=255)                                  cTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCAt                                                                                                                  >  2:201054/1‑149 (MQ=255)                                          cAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAac                                                                                                          <  3:263992/149‑1 (MQ=255)                                              gTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGcc                                                                                                              <  4:22613/141‑1 (MQ=255)                                              gTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGcc                                                                                                              >  3:22613/1‑141 (MQ=255)                                               ttttCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAAcaccac                                                                                                     <  1:266799/149‑1 (MQ=255)                                                    ccACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAgg                                                                                                 <  1:201054/148‑1 (MQ=255)                                                    ccACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGc                                                                                                >  6:52134/1‑149 (MQ=255)                                                        ggAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGt                                                                                            <  1:184386/149‑1 (MQ=255)                                                         gagaCTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTc                                                                                           <  3:237804/149‑1 (MQ=255)                                                              ttAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGtt                                                                                       >  2:64755/1‑148 (MQ=255)                                                                 aGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATa                                                                                   <  7:151546/149‑1 (MQ=255)                                                                 aGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATa                                                                                   <  5:152037/149‑1 (MQ=255)                                                                      aatgccgagccacagcgcctggtcgccaatcagatgATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCt                                                                                                                                                >  8:44898‑M1/37‑83 (MQ=255)                                                                      aatgccgagccacagcgcctggtcgccaatcagatgATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCt                                                                                                                                                <  7:44898‑M1/47‑1 (MQ=255)                                                                       gCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGttt                                                                             <  1:64755/149‑1 (MQ=255)                                                                           cGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCt                                                                                              >  3:230817/1‑128 (MQ=255)                                                                           cGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCt                                                                                              <  4:230817/128‑1 (MQ=255)                                                                           cGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTgcg                                                                          >  5:99267/1‑148 (MQ=255)                                                                                                tCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTaaaa                                                    <  5:52134/149‑1 (MQ=255)                                                                                                   aGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTaaaa                                                    >  6:168134/1‑146 (MQ=255)                                                                                                   aGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTaaaa                                                    <  5:168134/146‑1 (MQ=255)                                                                                                     gCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTgc                                                                           >  5:139470/1‑121 (MQ=255)                                                                                                     gCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTgc                                                                           <  6:139470/121‑1 (MQ=255)                                                                                                     agatgatgcatggccccaccggcaacgagccgttggtggcgctgcatCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCAtt                                                                                                                 <  7:44898‑M2/36‑1 (MQ=255)                                                                                                     agatgatgcatggccccaccggcaacgagccgttggtggcgctgcatCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCAtt                                                                                                                 >  8:44898‑M2/48‑83 (MQ=255)                                                                                                      gatgatgcatggccccaccggcaacgagccgttggtggcgctgcatCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACg                                              >  3:131727‑M2/47‑149 (MQ=255)                                                                                                        atatGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGca                                            >  6:5314/1‑149 (MQ=255)                                                                                                        atatGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGca                                            <  4:25205/149‑1 (MQ=255)                                                                                                                cgcCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCg                                    <  5:5314/149‑1 (MQ=255)                                                                                                                     ccaACGTCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAgg                               <  6:223148/149‑1 (MQ=255)                                                                                                                      caACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGc                              >  4:138750/1‑149 (MQ=255)                                                                                                                                      gTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGa                         >  7:154848/1‑138 (MQ=255)                                                                                                                                      gTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGa                         <  8:154848/138‑1 (MQ=255)                                                                                                                                       ggtggcgctgcatCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGcc              <  4:131727‑M2/135‑1 (MQ=255)                                                                                                                                                  atCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGcc  >  3:96408‑M2/3‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   TCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCC  >  NC_002947/2015505‑2015798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.