New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2015610 =	40 (0.950)	4 (0.100)	4/248	NT	10.5%	coding (783/888 nt)	PP_1795	hypothetical protein
	?	NC_002947	2015652 =	30 (0.740)					coding (741/888 nt)	PP_1795	hypothetical protein

CTCTGTACGGGATTATCGTATTGCATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCA  >  NC_002947/2015462‑2015756                                                                                                                                                     |                                                                                                                                                   ctctGTACGGGATTATCGTATTGCATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGata                                                                                                                                                    <  5:101366/149‑1 (MQ=255)  ggcacttttgtcggcgctcgtgctcaaggcctgccgctgctgtgcgtaggttttagcctggtagggccattgcgcaaacactatgaactgacaggcctggtggtgttcggcaatgccgagccacagcgcctggtcgccaatcagatgat                                                                                                                                                   >  3:96408‑M1/148‑149 (MQ=255)      tACGGGATTATCGTATTGCATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAg                                                                                                                                               <  7:169720/149‑1 (MQ=255)      tACGGGATTATCGTATTGCATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCAAGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAg                                                                                                                                               >  6:152037/1‑149 (MQ=255)           gATTATCGTATTGCATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCAcca                                                                                                                                          >  5:164708/1‑149 (MQ=255)              ggcgctcgtgctcaaggcctgccgctgctgtgcgtaggttttagcctggtagggccattgcgcaaacactatgaactgacaggcctggtggtgttcggcaatgccgagccacagcgcctggtcgccaatcagatgATGCAGCGccacc                                                                                                                                        <  4:131727‑M1/13‑1 (MQ=255)                     ttGCATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTc                                                                                                                                >  4:80044/1‑149 (MQ=255)                     ttGCATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTc                                                                                                                                >  4:149378/1‑149 (MQ=255)                        cATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGtt                                                                                                                             >  2:77226/1‑149 (MQ=255)                        cATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCACCACCAACGGCTCGtt                                                                                                                             <  6:164708/149‑1 (MQ=255)                            gtgtATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGcc                                                                                                                          <  7:101595/148‑1 (MQ=255)                            gtgtATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGAAGCGCCACCAACGGCTCGTTGCCg                                                                                                                         >  5:223148/1‑149 (MQ=255)                               tATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGTGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGt                                                                                                                       <  2:58332/148‑1 (MQ=255)                                aTTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAAGAGTGTTCTGCTCGGGTGCAGAGTTTTCCCCCGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTgg                                                                                                                     >  8:151546/1‑149 (MQ=255)                                 ttCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTggg                                                                                                                    >  4:237804/1‑149 (MQ=255)                                    cTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGc                                                                                                                  <  3:149378/148‑1 (MQ=255)                                     tGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCa                                                                                                                >  5:58997/1‑149 (MQ=255)                                       ttACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCAt                                                                                                               <  3:80044/148‑1 (MQ=255)                                           ttCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGcat                                                                                                           >  2:266799/1‑148 (MQ=255)                                            tCAGGCCATCTGGCCCGCTGCAATAGTGTACTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGcatca                                                                                                         >  2:184386/1‑149 (MQ=255)                                              cgtaggttttagcctggtagggccattgcgcaaacactatgaactgacaggcctggtggtgttcggcaatgccgagccacagcgcctggtcgccaatcagatgATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCatcatc                                                                                                       >  3:131727‑M1/104‑149 (MQ=255)                                                   aTCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGAtt                                                                                                  <  6:58997/149‑1 (MQ=255)                                                          ccGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGc                                                                                                             <  7:107539/131‑1 (MQ=255)                                                          ccGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGc                                                                                                             >  8:107539/1‑131 (MQ=255)                                                                      tgtTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGc                                                                               >  3:25205/1‑149 (MQ=255)                                                                             cTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCAt                                                                        >  2:201054/1‑149 (MQ=255)                                                                                     cAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAac                                                                <  3:263992/149‑1 (MQ=255)                                                                                         gTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGcc                                                                    <  4:22613/141‑1 (MQ=255)                                                                                         gTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGcc                                                                    >  3:22613/1‑141 (MQ=255)                                                                                          ttttCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAAcaccac                                                           <  1:266799/149‑1 (MQ=255)                                                                                               ccACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAgg                                                       <  1:201054/148‑1 (MQ=255)                                                                                               ccACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGc                                                      >  6:52134/1‑149 (MQ=255)                                                                                                   ggAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGt                                                  <  1:184386/149‑1 (MQ=255)                                                                                                    gagaCTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTc                                                 <  3:237804/149‑1 (MQ=255)                                                                                                         ttAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGtt                                             >  2:64755/1‑148 (MQ=255)                                                                                                            aGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATa                                         <  5:152037/149‑1 (MQ=255)                                                                                                            aGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATa                                         <  7:151546/149‑1 (MQ=255)                                                                                                                 aatgccgagccacagcgcctggtcgccaatcagatgATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCt                                                                                                      >  8:44898‑M1/37‑83 (MQ=255)                                                                                                                 aatgccgagccacagcgcctggtcgccaatcagatgATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCt                                                                                                      <  7:44898‑M1/47‑1 (MQ=255)                                                                                                                  gCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGttt                                   <  1:64755/149‑1 (MQ=255)                                                                                                                      cGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCt                                                    <  4:230817/128‑1 (MQ=255)                                                                                                                      cGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCt                                                    >  3:230817/1‑128 (MQ=255)                                                                                                                      cGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTgcg                                >  5:99267/1‑148 (MQ=255)                                                                                                                                           tCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTaaaa          <  5:52134/149‑1 (MQ=255)                                                                                                                                              aGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTaaaa          >  6:168134/1‑146 (MQ=255)                                                                                                                                              aGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTaaaa          <  5:168134/146‑1 (MQ=255)                                                                                                                                                gCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTgc                                 >  5:139470/1‑121 (MQ=255)                                                                                                                                                gCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTgc                                 <  6:139470/121‑1 (MQ=255)                                                                                                                                                   atatGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGca  >  6:5314/1‑149 (MQ=255)                                                                                                                                                   atatGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGca  <  4:25205/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CTCTGTACGGGATTATCGTATTGCATTGTGTATTCCTGTTACTTCAGGCCATCTGGCCCGCTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCA  >  NC_002947/2015462‑2015756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.