New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2057795 =	34 (0.810)	4 (0.100)	4/250	NT	11.1%	intergenic (+11/+117)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	2057893 =	31 (0.760)					intergenic (+109/+19)	PP_1832/PP_1833	oxidase/hypothetical protein

CCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2057873‑2057795 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATGACCGGCAATTCACTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACT  >  NC_002947/2057893‑2058037                                                                                                                                                                                                                                  CCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGAT                                                                             >  7:199163/1‑149   GCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATGA                                                                           >  3:117795/1‑149                 CGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATGACCGGCAATTCACTG                                                             <  8:199163/149‑1                                                             GTTCACCCGCGAAGCGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATGACCGGCAATTCACTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGA                 <  4:117795/149‑1                                                                            GGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATGACCGGCAATTCACTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACT  <  5:40323/149‑1                                                                                                                                                                                                                                  CCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2057873‑2057795 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATGACCGGCAATTCACTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACT  >  NC_002947/2057893‑2058037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.