| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2103503 = | 31 (0.730) | 4 (0.100) | 4/242 | NT | 11.4% | coding (1381/1515 nt) | PP_1879 | hypothetical protein |
| ? | NC_002947 | 2103536 = | 33 (0.830) | coding (1348/1515 nt) | PP_1879 | hypothetical protein | |||||
CTGCCTGTACCCAGCGAAACGGGCGTGATGGTGCTGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2103542‑2103503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgggtaCAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGACGTATGCCGGAACGGCCAGCTTTCCAGGGTAAAGGTGGTGCTTTCGCCCAGTGTGCGC > NC_002947/2103536‑2103681 CTGCCTGTACCCAGCGAAACGGGCGTGATGGTGCTGGGTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGACGTATGCCGGAACGGCCAGCT > 4:224982/1‑149 CTGTACCCAGCGAAACGGGCGTGATGGTGCTGGGTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGACGTATGCCGGAACGGC < 1:146735/140‑1 CTGTACCCAGCGAAACGGGCGTGATGGTGCTGGGTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGACGTATGCCGGAACGGC > 2:146735/1‑140 GTGATGGTGCTGGGTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGACGTATGCCGGAACGGCCAGCTTTCCAGGGTAAAGGTGGTGCTTTC < 3:224982/149‑1 GCTGGGTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGACGTATGCCGGAACGGCCAGCTTTCCAGGGTAAAGGTGGTGCTTTCGCCCAGT < 5:16639/148‑1 CTGGGTACAGGCAGCGCGGTGGCAATCCGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCCTTGACGAAATGCGACGTATGCCGGAACGGCCAGCTTTCCACGGTAAAGGAGGTCCTTTCGCCCAGTGT > 1:260460/1‑149 GGGTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGT > 3:119779/1‑68 GGGTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGT < 4:119779/68‑1 GGTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGAC < 5:36263/93‑1 GGTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGAC > 6:36263/1‑93 GTACAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGACGTATGCCGGAACGGCCAGCTTTCCAGGGTAAAGGTGGTGCTTTCGCCCAGTGTGCGC < 2:141738/149‑1 CTGCCTGTACCCAGCGAAACGGGCGTGATGGTGCTGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2103542‑2103503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgggtaCAGGCAGCGCGGTGGCAATCGGCAGCCTGATTTCCCGAGTGACGTTGCCGCTTTCCACCCCGTCGATCCAGGCGTTGACGAATTGCGACGTATGCCGGAACGGCCAGCTTTCCAGGGTAAAGGTGGTGCTTTCGCCCAGTGTGCGC > NC_002947/2103536‑2103681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |