New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2104095 =	42 (0.990)	3 (0.070)	3/246	NT	7.5%	coding (789/1515 nt)	PP_1879	hypothetical protein
	?	NC_002947	2104134 =	34 (0.840)					coding (750/1515 nt)	PP_1879	hypothetical protein

TGCAGGACCGCGCTGGCACACAGCCCCAGCGTGCGCTAGCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2104138‑2104095 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtcCTGCACTTCATAACGCACGTAACGCGTGCCGTTGCCGGACTGGCGAATGAAAGCGCCCGGGAAGGTCAGCTCGAGCGGTTTGCTGGTGCCTAGCGGGCCCAGTGTTTCGATGTGCTCCTGGGTCAGTGTCATCATGTCGACCATTTC  >  NC_002947/2104134‑2104280                                                                                                                                                                                                 TGCAGGACCGCGCTGGCACACAGCCCCAGCGTGCGCTAGCGGTCCTGCACTTCATAACGCACGTAACGCGTGCCGTTGCCGGACTGGCGAATGAAAGCGCCCGGGAAGGTCAGCTCGAGCGGTTTGCTGGTGCCTAGCGGGCCCAGTGT                                            >  4:213613/1‑149    AGGACCGCGCTGGCACACAGCCCCAGCGTGCGCTAGCGGTCCTGCACTTCATAACGCACGTAACGCGTGCCGTTGCCGGACTGGCGAATGAAAGCGCCCGGGAAGGTCAGCTCGAGCGGTTTGCTGGTGTCTAGCGGGCCCAGTGTTTC                                         <  5:200916/149‑1    AGGACCGCGCTGGCACACAGCCCCAGCGTGCGCTAGCGGTCCTGCACTTCATAACGCACGTAACGCGTGCCGTTGCCGGACTGGCGAATGAAAGCGCCCGGGAAGGTCAGCTCGAGCGGTTTGCTGGTGTCTAGCGGGCCCAGTGTTTC                                         >  6:200916/1‑149                                           TCCTGCACTTCATAACGCACGTAACGCGTGCCGTTGCCGGACTGGCGAATGAAAGCGCCCGGGAAGGTCAGCTCGAGCGGTTTGCTGGTGCCTAGCGGGCCCAGTGTTTCGATGTGCTCCTGGGTCAGTGTCATCATGTCGACCATTTC  <  1:261028/149‑1                                           TCCTGCACTTCATAACGCACGTAACGCGTGCCGTTGCCGGACTGGCGAATGAAAGCGCCCGGGAAGGTCAGCTCGAGCGGTTTGCTGGTGCCTAGCGGGCCCAGTGTTTCGATGTGCTCCTGGGTCAGTGTCATCATGTCGACCATTTC  >  3:112899/1‑149                                                                                                                                                                                                 TGCAGGACCGCGCTGGCACACAGCCCCAGCGTGCGCTAGCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2104138‑2104095 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtcCTGCACTTCATAACGCACGTAACGCGTGCCGTTGCCGGACTGGCGAATGAAAGCGCCCGGGAAGGTCAGCTCGAGCGGTTTGCTGGTGCCTAGCGGGCCCAGTGTTTCGATGTGCTCCTGGGTCAGTGTCATCATGTCGACCATTTC  >  NC_002947/2104134‑2104280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.