New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2242860	37 (0.880)	3 (0.070)	3/248	NT	7.9%	coding (433/540 nt)	PP_1978	TetR family transcriptional regulator
	?	NC_002947	= 2242892	34 (0.840)					coding (465/540 nt)	PP_1978	TetR family transcriptional regulator

ACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGTTGATGACTGCCGCGATGGTCGACCGCCCTGAGGATGCCGACAAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2242711‑2242860 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcCAGCCCCCCAACCATCAGGGCCAGGTCGGCCAGCGCTTTGTCGGCATCCTCAGGGCGGTCGACCATCGCGGCAGTCATCAACTCGATGTGCTCGGCCAGCACCTCGCGGAAGACCTCCGGCAGGCGCTGCATTTCGCCCAACGCGT  <  NC_002947/2242892‑2242747                                                                                                                                                                                                                                                                                                          ACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGTTGATGACTGCCGCGATGGTCGACCGCCCTGAGGATGCCGACAAAGCG                                                                                                                                                     >  2:172305/1‑149                                            GGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGTTGATGACTGCCGCGATGGTCGACCGCCCTGAGGATGCCGACAAAGCGCCAGCCCCCCAACCATCAGGGCCAGGTCGGCCAGCGCTTTGT                                                                                                           <  3:245808/148‑1                                                                              GAGGTGCTGGCCGAGCACATCGAGTTGATGACTGCCGCGATGGTCGACCGCCCTGAGGATGCCGACAAAGCGCCAGCCCCCCAACCATCAGGGCCAGGTCGGCCAGCGCTTTGTC                                                                                                          <  3:249700/115‑1                                                                              GAGGTGCTGGCCGAGCACATCGAGTTGATGACTGCCGCGATGGTCGACCGCCCTGAGGATGCCGACAAAGCGCCAGCCCCCCAACCATCAGGGCCAGGTCGGCCAGCGCTTTGTC                                                                                                          >  4:249700/1‑115                                                                                                                                                    CGCCAGCCCCCCAACCATCAGGGCCAGGTCGGCCAGCGCTTTGTCGGCATCCTCAGGGCGGTCGACCATCGCGGCAGTCATCAACTCGATGTGCTCGGCCAGCACCTCGCGGAAGACCTCCGGCAGGCGCTGCATTTCGCCCAACGCGT  <  5:46842/149‑1                                                                                                                                                                                                                                                                                                          ACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGTTGATGACTGCCGCGATGGTCGACCGCCCTGAGGATGCCGACAAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2242711‑2242860 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcCAGCCCCCCAACCATCAGGGCCAGGTCGGCCAGCGCTTTGTCGGCATCCTCAGGGCGGTCGACCATCGCGGCAGTCATCAACTCGATGTGCTCGGCCAGCACCTCGCGGAAGACCTCCGGCAGGCGCTGCATTTCGCCCAACGCGT  <  NC_002947/2242892‑2242747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.