New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2320096	41 (0.970)	4 (0.100)	4/250	NT	8.6%	coding (1109/1296 nt)	PP_2040	MFS transporter
	?	NC_002947	= 2320133	45 (1.100)					coding (1146/1296 nt)	PP_2040	MFS transporter

GAGCGGATCGTCAGCCTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2319945‑2320096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcCCCGGCGCCCTGCACCAGCAAACCGGTGACCACCGGTGCCGA  <  NC_002947/2320133‑2320092                                                                                                                                                                                                    GAGCGGATCGTCAGCCTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTC                                               <  5:112587/149‑1             AGCCTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCAGTCATCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCCCCGGCGCC                                   >  7:170815/1‑149                                       GCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCCCCGGCGCCCTGCACCAGCAAACCGGTGACCACCG         >  5:144752/1‑149                                           GTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCCCCGGCGCCCTGCACCAGCAAACCGGTGACCACCGGTGC     <  6:144752/149‑1                                              ATGTACTCCGTTGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCCCCGGCGCCCTGCACCAGCAAACCGGTGACCACCGGTGCCGA  <  8:170815/149‑1                                                                                                                                                                                                    GAGCGGATCGTCAGCCTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2319945‑2320096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcCCCGGCGCCCTGCACCAGCAAACCGGTGACCACCGGTGCCGA  <  NC_002947/2320133‑2320092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.