| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2480384 = | 52 (1.230) | 3 (0.070) | 3/246 | NT | 6.3% | coding (177/393 nt) | PP_2174 | hypothetical protein |
| ? | NC_002947 | 2480429 = | 39 (0.970) | coding (132/393 nt) | PP_2174 | hypothetical protein | |||||
CTGCTACTCACCCCACCCAAGGCAGTGAGCCACTGCCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2480512‑2480384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTGCA > NC_002947/2480429‑2480575 CTGCTACTCACCCCACCCAAGGCAGTGAGCCACTGCCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCC < 1:134093/129‑1CTGCTACTCACCCCACCCAAGGCAGTGAGCCACTGCCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCC > 2:134093/1‑129 CGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGC > 3:3739/1‑113 CGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGC < 4:3739/113‑1 TACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCG > 4:245948/1‑148 TGCCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTG > 6:75791/1‑149 CCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTGCA < 5:75791/149‑1 CCGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTGCA < 6:129017/149‑1 CTGCTACTCACCCCACCCAAGGCAGTGAGCCACTGCCACTGCAGCCAGTGCCGCAAAAGTCACGGCGCCGCATTCGCTTCGTACGGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2480512‑2480384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccGTACGAAGCGAATGCGGCGCCGTGACTTTTGCGGCACTGGCTGCAGTGGCAGTGGCTCACTGCCTTGGGTGGGGTGAGTAGCAGGTAAGAGACGGCTGCGCACAAGCAGCTTCCTTGGTATGCCTCTGTCATTGGCGCTTCCGTGCA > NC_002947/2480429‑2480575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |