| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2510535 | 36 (0.850) | 4 (0.100) | 4/240 | NT | 10.5% | coding (1196/1725 nt) | copA‑I | copper resistance protein A |
| ? | NC_002947 | = 2510556 | 35 (0.890) | coding (1175/1725 nt) | copA‑I | copper resistance protein A | |||||
GGGTAGGGGCTGCGCAGGTCGGCGTAGGTCAGCACGCGGCGACCATTGTCACGCAGGCCTATGCCAGGATCGGCCAGGTTGGGGCGCGGTGCCATGGTCTGCATGTCCACCAGCGGGTTGTCGGTTTCACTGATCGGGTGTTGCTGCATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2510382‑2510535‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggccgGTATGGACCACGCCGCCATGTCGGCCATGCAGCAACACCCGATCAGTGAAACCGACAACCCGCTGGTGGACATGCAGACCATGGCACCGCGCCCCAACCTGGCCGATCCTGGCATAGGCCTGCGTGACAATGGTCGCCGCGTGCTGA < NC_002947/2510556‑2510410 GGGTAGGGGCTGCGCAGGTCGGCGTAGGTCAGCACGCGGCGACCATTGTCACGCAGGCCTATGCCAGGATCGGCCAGGTTGGGGCGCGGTGCCATGGTCTGCATGTCCACCAGCGGGTTGTCGGTTTCACTGATCGGGTGTTGCTGCAT < 1:61783/149‑1GGGTAGGGGCTGCGCAGGTCGGCGTAGGTCAGCACGCGGCGACCATTGTCACGCAGGCCTATGCCAGGATCGGCCAGGTTGGGGCGCGGTGCCATGGTCTGCATGTCCACCAGCGGGTTGTCGGTTTCACTGATCGGGTGTTGCTGCAT > 3:100456/1‑149 CAGGATCGGCCAGGTTGGGGCGCGGTGCCATGGTCTGCATGTCCACCAGCGGGTTGTCGGTTTCACTGATCGGGTGTTGCTGCATGGCCGGTATGGACCACGCCGCCATGTCGGCCATGCA < 3:259497/121‑1 CAGGATCGGCCAGGTTGGGGCGCGGTGCCATGGTCTGCATGTCCACCAGCGGGTTGTCGGTTTCACTGATCGGGTGTTGCTGCATGGCCGGTATGGACCACGCCGCCATGTCGGCCATGCA > 4:259497/1‑121 GGCGCGGTGCCATGGTCTGCATGTCCACCAGCGGGTTGTCGGTTTCACTGATCGGGTGTTGCTGCATGGCCGGTATGGACCACGCCGCCATGTCGGCCATGC > 1:113143/1‑102 GGCGCGGTGCCATGGTCTGCATGTCCACCAGCGGGTTGTCGGTTTCACTGATCGGGTGTTGCTGCATGGCCGGTATGGACCACGCCGCCATGTCGGCCATGC < 2:113143/102‑1 GCCGGTATGGACCACGCCGCCATGTCGGCCATGCAGCAACAACCGATCAGTGAAACCGACAACCCGCTGGTGGACATGCAGACCATGGCACCGCGCCCCAACCTGGCCGATCCTGGCATAGGCCTGCGTGACAATGGTCGCCGCGTGC < 6:81688/148‑1 CGGGATGGACCCCGCCGCCATGTCGGCCATGCACCAACACCCGATCCGTCAACCCGACAACCCGCTGGTGGACATGCAGACCATGGCACCGCGCCCCAACCTGGCCGATCCTGGCATAGTCCTGCGTGACAATGGTCGCCGCGTGCTGA < 4:2371/149‑1 GGGTAGGGGCTGCGCAGGTCGGCGTAGGTCAGCACGCGGCGACCATTGTCACGCAGGCCTATGCCAGGATCGGCCAGGTTGGGGCGCGGTGCCATGGTCTGCATGTCCACCAGCGGGTTGTCGGTTTCACTGATCGGGTGTTGCTGCATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2510382‑2510535‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggccgGTATGGACCACGCCGCCATGTCGGCCATGCAGCAACACCCGATCAGTGAAACCGACAACCCGCTGGTGGACATGCAGACCATGGCACCGCGCCCCAACCTGGCCGATCCTGGCATAGGCCTGCGTGACAATGGTCGCCGCGTGCTGA < NC_002947/2510556‑2510410 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |